RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 CTBP1Q13363 440 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 PMS2P11Q13670 270 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 USP39Q53GS9 565 aaKnown RBP2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 FAM102AQ5T9C2 384 aaPredicted RBP2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 UTP14CQ5TAP6 766 aaKnown RBP2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 AGAP9Q5VTM2 703 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 IZUMO3Q5VZ72 239 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 GGT6Q6P531 493 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 ZNF365Q70YC5 407 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 PDSS2Q86YH6 399 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 MYLK4Q86YV6 388 aaPredicted RBP2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 C1orf210Q8IVY1 113 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 RHOT2Q8IXI1 618 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 MYRIPQ8NFW9 859 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 TBC1D15Q8TC07 691 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 NUP133Q8WUM0 1156 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 TRIM54Q9BYV2 358 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 UNKQ9C0B0 810 aaKnown RBP2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 SMURF2Q9HAU4 748 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 ARFGAP3Q9NP61 516 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 PNPLA8Q9NP80 782 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 STARD7Q9NQZ5 370 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 RLIMQ9NVW2 624 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 PARPBPQ9NWS1 579 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 CFAP97Q9P2B7 532 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 SRRDQ9UH36 339 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 AGAP1Q9UPQ3 857 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 SORCS3Q9UPU3 1222 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 ATP11BQ9Y2G3 1177 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 LRCH1Q9Y2L9 728 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 TSC22D4Q9Y3Q8 395 aa2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 MORC2Q9Y6X9 1032 aaPredicted RBP2.96□□□□□ -1.94
CBX3P9-201ENST00000402326 PLSCR1O15162 318 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 TBC1D4O60343 1298 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 RPS6KA4O75676 772 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 FGF18O76093 207 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 PRSS23O95084 383 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SCAF4O95104 1147 aaKnown RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 ABHD16AO95870 558 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 GNAI2P04899 355 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 GJB1P08034 283 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SPATA31D3P0C874 917 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 RARBP10826 455 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 RPL17P18621 184 aaKnown RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 CHKAP35790 457 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 RNASE9P60153 205 aaKnown RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 HTRA4P83105 476 aaPredicted RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 TNFAIP2Q03169 654 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 BTKQ06187 659 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SLC13A2Q13183 592 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 TOB2Q14106 344 aaPredicted RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 KIF22Q14807 665 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 ELF2Q15723 593 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 ARL13BQ3SXY8 428 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 RABL3Q5HYI8 236 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 DGKKQ5KSL6 1271 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SPDYAQ5MJ70 313 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 EMC10Q5UCC4 262 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 RRAGBQ5VZM2 374 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 TSHZ3Q63HK5 1081 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 METRNLQ641Q3 311 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SPATA31D4Q6ZUB0 917 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 GDF7Q7Z4P5 450 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 PRRT2Q7Z6L0 340 aaPredicted RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 MICU3Q86XE3 530 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 ZFPM1Q8IX07 1006 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 ATP11CQ8NB49 1132 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SLC17A8Q8NDX2 589 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 OR6B3Q8NGW1 331 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 IL17DQ8TAD2 202 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 CPT1CQ8TCG5 803 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 KBTBD7Q8WVZ9 684 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 DDX17Q92841 729 aaKnown RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 EXTL1Q92935 676 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SCAMP4Q969E2 229 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 NMD3Q96D46 503 aaKnown RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 SUCLG2Q96I99 432 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 PNKPQ96T60 521 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 HERPUD2Q9BSE4 406 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 KRTAP3-1Q9BYR8 98 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 ZNF703Q9H7S9 590 aaPredicted RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 AS3MTQ9HBK9 375 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 MRPS18AQ9NVS2 196 aaKnown RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 TRPM5Q9NZQ8 1165 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 AFF4Q9UHB7 1163 aaKnown RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 MED16Q9Y2X0 877 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 USP15Q9Y4E8 981 aaPredicted RBP2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 PCDHGB3Q9Y5G1 929 aa2.95□□□□□ -1.94
CBX3P9-201ENST00000402326 A0A087WV62 115 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 A0A1B0GTW7 788 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 TRIM43BA6NCK2 446 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 ZNF785A8K8V0 405 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 GRXCR1A8MXD5 290 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 FOXN3O00409 490 aaPredicted RBP2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 ZNF185O15231 689 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 FAM20BO75063 409 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 DNAJB5O75953 348 aa2.94□□□□□ -1.94
CBX3P9-201ENST00000402326 UNC5CO95185 931 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms