RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 PSMD12O00232 456 aaPredicted RBP11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 PLIN5Q00G26 463 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 HIC1Q14526 733 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 BTN2A1Q7KYR7 527 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 USE1Q9NZ43 259 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 ZNF70Q9UC06 446 aaPredicted RBP11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 POTECB2RU33 542 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 PPM1LQ5SGD2 360 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 CCDC137Q6PK04 289 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 PPP1R2P1Q96PQ5 205 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 FHDC1Q9C0D6 1143 aaPredicted RBP11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 MLXIPLQ9NP71 852 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 MPP6Q9NZW5 540 aa11.55□□□□□ -0.56
CACNA1C-215ENST00000399637 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 CYTH3O43739 400 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 DEAF1O75398 565 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 NDUFS3O75489 264 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 GGCXP38435 758 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 GRM4Q14833 912 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 PCSK7Q16549 785 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 TNIP2Q8NFZ5 429 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 RIN2Q8WYP3 895 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 UTYO14607 1347 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 PVALEFA0A1B0GWK0 134 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 GMNCA6NCL1 334 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 H2AFYO75367 372 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 NPTXRO95502 500 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 S100A5P33763 92 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 OLFML2BQ68BL8 750 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 FGD2Q7Z6J4 655 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 NUP93Q8N1F7 819 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■■■ 45.2
CACNA1C-215ENST00000399637 EIF2AK1Q9BQI3 630 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 AGAP1Q9UPQ3 857 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 LRRIQ3A6PVS8 624 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 EFNA5P52803 228 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 NBPF9Q3BBW0 867 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 ADGRF4Q8IZF3 695 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 WWP1Q9H0M0 922 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 LATS2Q9NRM7 1088 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 ADGRL3Q9HAR2 1447 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 SNUPNO95149 360 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 SLC1A1P43005 524 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 NUMBP49757 651 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 USP17L6PQ6QN14 398 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 CHSY1Q86X52 802 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 GRAMD1AQ96CP6 724 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 PNKPQ96T60 521 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 TMEM47Q9BQJ4 181 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 MINPP1Q9UNW1 487 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 C16orf96A6NNT2 1141 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 FDX1P10109 184 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 PRCPP42785 496 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 SV2CQ496J9 727 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 KIAA1324Q6UXG2 1013 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 SYDE1Q6ZW31 735 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 AIFM3Q96NN9 605 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 OSBPL9Q96SU4 736 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 KRCC1Q9NPI7 259 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 MYPNQ86TC9 1320 aa11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.54□□□□□ -0.56
CACNA1C-215ENST00000399637 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 GTF2E2P29084 291 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 POLD3Q15054 466 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 C16orf89Q6UX73 402 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 TADA1Q96BN2 335 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 PFASO15067 1338 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 FKTNO75072 461 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 FAM107AO95990 144 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 DHX34Q14147 1143 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 C1orf54Q8WWF1 131 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 MED15Q96RN5 788 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 CCT7Q99832 543 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 GPN3Q9UHW5 284 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 PLEKHG2Q9H7P9 1386 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 HMGB3O15347 200 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 NCK2O43639 380 aa11.53□□□□□ -0.56
CACNA1C-215ENST00000399637 RTN2O75298 545 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms