RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 INTS2Q9H0H0 1204 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 SIX2Q9NPC8 291 aa13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 MRPL17Q9NRX2 175 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 GCNT4Q9P109 453 aa13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 FNIP2Q9P278 1114 aa13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 FBXL5Q9UKA1 691 aa13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 AJAP1Q9UKB5 411 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 BACE2Q9Y5Z0 518 aa13.31□□□□□ -0.28
HLA-DQB1-203ENST00000399082 GTPBP10A4D1E9 387 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 LGALS16A8MUM7 142 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 PER2O15055 1255 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 TACC1O75410 805 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 IGFBP4P22692 258 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 WARSP23381 471 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 RBM10P98175 930 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 YWHAHQ04917 246 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 HYAL1Q12794 435 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 KCNC3Q14003 757 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 DUSP6Q16828 381 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 SLC8B1Q6J4K2 584 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 KIAA1841Q6NSI8 718 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 DPH6Q7L8W6 267 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 UBR7Q8N806 425 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 VN1R2Q8NFZ6 395 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 MICAL1Q8TDZ2 1067 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 GAS2L1Q99501 681 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 PKMYT1Q99640 499 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 RBSNQ9H1K0 784 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 HMGXB4Q9UGU5 601 aa13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-203ENST00000399082 TEX33O43247 280 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 HUS1O60921 280 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 CLASP2O75122 1294 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 VNN2O95498 520 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 GLP2RO95838 553 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 WEE2P0C1S8 567 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 OR4Q2P0C623 313 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 FOSL2P15408 326 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 LMO2P25791 158 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 PON1P27169 355 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 NRIP1P48552 1158 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 KLK7P49862 253 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 TNNC1P63316 161 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 LRMPQ12912 555 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 CTXN3Q4LDR2 81 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ZNF280DQ6N043 979 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 GJB7Q6PEY0 223 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 LILRA6Q6PI73 481 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 TRIM65Q6PJ69 517 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 RBM23Q86U06 439 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 LRRTM3Q86VH5 581 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 GLYCTKQ8IVS8 523 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 WHAMMQ8TF30 809 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 SLC22A17Q8WUG5 538 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 KREMEN1Q96MU8 473 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 NAP1L5Q96NT1 182 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 TWNKQ96RR1 684 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 MMS19Q96T76 1030 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 TMLHEQ9NVH6 421 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 DSEQ9UL01 958 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 SIK3Q9Y2K2 1263 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 CDY1Q9Y6F8 540 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 EYSQ5T1H1 3165 aa13.29□□□□□ -0.28
HLA-DQB1-203ENST00000399082 A0A1B0GTH6 734 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 LINC01565O15544 149 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 AP5Z1O43299 807 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 FAM163BP0C2L3 166 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ACO1P21399 889 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 OR1D2P34982 312 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 CA8P35219 290 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 NDUFV1P49821 464 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ROR1Q01973 937 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 INCA1Q0VD86 236 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 PTPN21Q16825 1174 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 EXOC3L4Q17RC7 722 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 PDXDC1Q6P996 788 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 FEZF2Q8TBJ5 459 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 FAXDC2Q96IV6 333 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 LPIN3Q9BQK8 851 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 IMPG2Q9BZV3 1241 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 DPEP3Q9H4B8 488 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 DDX43Q9NXZ2 648 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 SSX2IPQ9Y2D8 614 aa13.28□□□□□ -0.28
HLA-DQB1-203ENST00000399082 ARHGEF37A1IGU5 675 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 OR6C75A6NL08 312 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 H7C4K7 107 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms