RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 DPH6Q7L8W6 267 aa7.84□□□□□ -1.15
RGPD1-201ENST00000398193 FLRT1Q9NZU1 646 aa7.84□□□□□ -1.15
RGPD1-201ENST00000398193 TRPV2Q9Y5S1 764 aa7.84□□□□□ -1.15
RGPD1-201ENST00000398193 TMEM191CA6NGB0 347 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 SIGLEC16A6NMB1 481 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 DPYSL4O14531 572 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 DYNC1LI2O43237 492 aaPredicted RBP7.84□□□□□ -1.16
RGPD1-201ENST00000398193 VTNP04004 478 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 NFICP08651 508 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 DESP17661 470 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 RAD23BP54727 409 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 DR1Q01658 176 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 MESDQ14696 234 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 FAM26DQ5JW98 314 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 CFAP58Q5T655 872 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 LMBRD2Q68DH5 695 aaPredicted RBP7.84□□□□□ -1.16
RGPD1-201ENST00000398193 SPOPLQ6IQ16 392 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 THNSL1Q8IYQ7 743 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 CASKIN2Q8WXE0 1202 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 SLC38A7Q9NVC3 462 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 ANAPC7Q9UJX3 599 aa7.84□□□□□ -1.16
RGPD1-201ENST00000398193 M0QZ92 97 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 TNPO2O14787 897 aaKnown RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 CST3P01034 146 aaPredicted RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 LACTBP83111 547 aaPredicted RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 TMEM63BQ5T3F8 832 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 CYFIP2Q96F07 1278 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 HPDLQ96IR7 371 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 WHRNQ9P202 907 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 HARSP12081 509 aaKnown RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 SKIP12755 728 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 PTGIRP43119 386 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 MRPS6P82932 125 aaKnown RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 SV2CQ496J9 727 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 EMC10Q5UCC4 262 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 DNAJC24Q6P3W2 148 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 LCLAT1Q6UWP7 414 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 ERICH1Q86X53 443 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 C7orf31Q8N865 590 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 ARID3AQ99856 593 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 PHACTR1Q9C0D0 580 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 UBN1Q9NPG3 1134 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 PACSIN2Q9UNF0 486 aaPredicted RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 UMODL1Q5DID0 1318 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 HOXA11P31270 313 aaPredicted RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 SGO2Q562F6 1265 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 DUPD1Q68J44 220 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 CATSPER4Q7RTX7 472 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 TOP6BLQ8N6T0 577 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 SETD4Q9NVD3 440 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 MEFVO15553 781 aaPredicted RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 ADCY6O43306 1168 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 NPTXRO95502 500 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 EIF3BP55884 814 aaKnown RBP7.83□□□□□ -1.16
RGPD1-201ENST00000398193 SNX17Q15036 470 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 SLC4A11Q8NBS3 891 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 EXOC4Q96A65 974 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 CPB2Q96IY4 423 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 EPC1Q9H2F5 836 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 EPB41L5Q9HCM4 733 aa7.83□□□□□ -1.16
RGPD1-201ENST00000398193 TMEM88BA6NKF7 163 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 INPPL1O15357 1258 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 ITGB3P05106 788 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 WARSP23381 471 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 HOXD10P28358 340 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 COILP38432 576 aaPredicted RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 TNNT3P45378 269 aaPredicted RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 PRMT2P55345 433 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 MKRN3Q13064 507 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 CPA5Q8WXQ8 436 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 MCRS1Q96EZ8 462 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 DDX27Q96GQ7 796 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 ERP44Q9BS26 406 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 TSEN34Q9BSV6 310 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 GTF2IRD1Q9UHL9 959 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 SRRM3A6NNA2 597 aaPredicted RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 SMAPO00193 183 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 PIRO00625 290 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 TOMM70O94826 608 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 RRM1P23921 792 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 OAS2P29728 719 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 LRPAP1P30533 357 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 PTK6Q13882 451 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 SIX1Q15475 284 aaPredicted RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 CCNG2Q16589 344 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 IPO4Q8TEX9 1081 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 NT5C1AQ9BXI3 368 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 MCM3APO60318 1980 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 SEPT4O43236 478 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 GLI1P08151 1106 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 KRT7P08729 469 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 ACADSBP45954 432 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 GUCY2DQ02846 1103 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 MGAT3Q09327 533 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 HADHQ16836 314 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 MRPL10Q7Z7H8 261 aaKnown RBP7.82□□□□□ -1.16
RGPD1-201ENST00000398193 GPIHBP1Q8IV16 184 aa7.82□□□□□ -1.16
RGPD1-201ENST00000398193 RSPH1Q8WYR4 309 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms