RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 GPR88Q9GZN0 384 aa16.24■□□□□ 0.19
SUMO3-203ENST00000397898 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
SUMO3-203ENST00000397898 COLQQ9Y215 455 aaPredicted RBP16.24■□□□□ 0.19
SUMO3-203ENST00000397898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.199e-8■□□□□ 11.3
SUMO3-203ENST00000397898 A0A1W2PPC1 479 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 C5orf67F2Z3F1 127 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 F8VZ95 297 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 FOXN3O00409 490 aaPredicted RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 FAM163BP0C2L3 166 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 TYMPP19971 482 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 FGFR3P22607 806 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 DNAJB2P25686 324 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 SMAD3P84022 425 aaKnown RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 INCA1Q0VD86 236 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 PPP2R2DQ66LE6 453 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 DDX53Q86TM3 631 aaKnown RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 METTL23Q86XA0 190 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 OR6B3Q8NGW1 331 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 B3GALT6Q96L58 329 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 SAMD11Q96NU1 681 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 FAM124BQ9H5Z6 455 aaPredicted RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 BARX2Q9UMQ3 279 aaPredicted RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 LUC7L2Q9Y383 392 aaKnown RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 GABRDO14764 452 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 CILPO75339 1184 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 SOD2P04179 222 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 RB1P06400 928 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 TPM1P09493 284 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 PNMA6AP0CW24 399 aaPredicted RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 WARSP23381 471 aaKnown RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 ERVK-21P61565 698 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 YWHAHQ04917 246 aaPredicted RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 USP41Q3LFD5 358 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 RTP2Q5QGT7 225 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 TMEM270Q6UE05 265 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 OSTM1Q86WC4 334 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 TTC39CQ8N584 583 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 ZNF397Q8NF99 534 aaPredicted RBP16.23■□□□□ 0.19
SUMO3-203ENST00000397898 TTPALQ9BTX7 342 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 SNX25Q9H3E2 840 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 SLC28A3Q9HAS3 691 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 HMGXB4Q9UGU5 601 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 PCDHB4Q9Y5E5 795 aa16.23■□□□□ 0.19
SUMO3-203ENST00000397898 LRRC53A6NM62 1247 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 KRT5P13647 590 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
SUMO3-203ENST00000397898 GNL1P36915 607 aaPredicted RBP16.22■□□□□ 0.19
SUMO3-203ENST00000397898 USP8P40818 1118 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 LHX1P48742 406 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 NDST1P52848 882 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 GSDMDP57764 484 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 ZBED6P86452 979 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 VARS2Q5ST30 1063 aaKnown RBP16.22■□□□□ 0.19
SUMO3-203ENST00000397898 OVOS1Q6IE37 1185 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 SPATA18Q8TC71 538 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
SUMO3-203ENST00000397898 CHST7Q9NS84 486 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 DDX43Q9NXZ2 648 aaKnown RBP16.22■□□□□ 0.19
SUMO3-203ENST00000397898 STK39Q9UEW8 545 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 MYO6Q9UM54 1294 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 CNTN6Q9UQ52 1028 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 STXBP5LQ9Y2K9 1186 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 NME7Q9Y5B8 376 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 NLRC5Q86WI3 1866 aa16.22■□□□□ 0.19
SUMO3-203ENST00000397898 A8MXQ7 604 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 HCRTO43612 131 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 OAZ2O95190 189 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 LMO2P25791 158 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 KRT9P35527 623 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 SOX5P35711 763 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 STAT1P42224 750 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 ADKP55263 362 aaKnown RBP16.21■□□□□ 0.19
SUMO3-203ENST00000397898 GOLGA8FQ08AF8 430 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 GOLGA8DPQ0D2H9 430 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 LRIT3Q3SXY7 679 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 ZNF394Q53GI3 561 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 PDXDC1Q6P996 788 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 UNC93AQ86WB7 457 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 FAM71AQ8IYT1 594 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 VPS52Q8N1B4 723 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 WHAMMQ8TF30 809 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 TIFAQ96CG3 184 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 TWNKQ96RR1 684 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 C11orf84Q9BUA3 381 aaPredicted RBP16.21■□□□□ 0.19
SUMO3-203ENST00000397898 HERC2P3Q9BVR0 1158 aa16.21■□□□□ 0.19
SUMO3-203ENST00000397898 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.21■□□□□ 0.19
SUMO3-203ENST00000397898 PUF60Q9UHX1 559 aaKnown RBP16.21■□□□□ 0.19
SUMO3-203ENST00000397898 AKR1B15C9JRZ8 316 aaPredicted RBP16.21■□□□□ 0.18
SUMO3-203ENST00000397898 MFAP3LO75121 409 aa16.21■□□□□ 0.18
SUMO3-203ENST00000397898 PDGFRBP09619 1106 aa16.21■□□□□ 0.18
SUMO3-203ENST00000397898 MRPL58Q14197 206 aaKnown RBP16.21■□□□□ 0.18
SUMO3-203ENST00000397898 PRPF38BQ5VTL8 546 aaKnown RBP16.21■□□□□ 0.18
SUMO3-203ENST00000397898 KIAA1841Q6NSI8 718 aa16.21■□□□□ 0.18
SUMO3-203ENST00000397898 GPIHBP1Q8IV16 184 aa16.21■□□□□ 0.18
SUMO3-203ENST00000397898 CNGA4Q8IV77 575 aa16.21■□□□□ 0.18
SUMO3-203ENST00000397898 RBBP8NLQ8NC74 664 aaPredicted RBP16.21■□□□□ 0.18
SUMO3-203ENST00000397898 ZNF830Q96NB3 372 aaPredicted RBP16.21■□□□□ 0.18
SUMO3-203ENST00000397898 RTP3Q9BQQ7 232 aa16.21■□□□□ 0.18
SUMO3-203ENST00000397898 NT5C1AQ9BXI3 368 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms