RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CISHQ9NSE2 258 aa20.82■□□□□ 0.92
MAP1LC3A-203ENST00000397709 LAMA3Q16787 3333 aa20.82■□□□□ 0.92
MAP1LC3A-203ENST00000397709 A0A1W2PQJ5 194 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 GYPCP04921 128 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 JAM2P57087 298 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 UBE3AQ05086 875 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 TRIM14Q14142 442 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 MRPL58Q14197 206 aaKnown RBP20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ARHGAP44Q17R89 818 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 METTL23Q86XA0 190 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 FBXO22Q8NEZ5 403 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 SPPL3Q8TCT6 385 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 SHC3Q92529 594 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 BAP1Q92560 729 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 B3GALT6Q96L58 329 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 NLRC4Q9NPP4 1024 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 BARX2Q9UMQ3 279 aaPredicted RBP20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 NME7Q9Y5B8 376 aa20.81■□□□□ 0.92
MAP1LC3A-203ENST00000397709 H3BNC9 293 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CILPO75339 1184 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 OAZ2O95190 189 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CD58P19256 250 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 LHX1P48742 406 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 DSG1Q02413 1049 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 YWHAHQ04917 246 aaPredicted RBP20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 TBX2Q13207 712 aaPredicted RBP20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 RAPGEF1Q13905 1077 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 DRAP1Q14919 205 aaPredicted RBP20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 VARS2Q5ST30 1063 aaKnown RBP20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 OVOS1Q6IE37 1185 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 VPS52Q8N1B4 723 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 RTP3Q9BQQ7 232 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ZBP1Q9H171 429 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ALG13Q9NP73 1137 aaKnown RBP20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CNTN6Q9UQ52 1028 aa20.8■□□□□ 0.92
MAP1LC3A-203ENST00000397709 F8VZ95 297 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 RNF225M0QZC1 329 aaPredicted RBP20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 GNL1P36915 607 aaPredicted RBP20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 GLUD2P49448 558 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ZNF132P52740 706 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 KIAA0319Q5VV43 1072 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CACNA2D4Q7Z3S7 1137 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 UNC93AQ86WB7 457 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CEP57Q86XR8 500 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 GPR65Q8IYL9 337 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 OR6B3Q8NGW1 331 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 WHAMMQ8TF30 809 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 PIK3R5Q8WYR1 880 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 SNX25Q9H3E2 840 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CERS4Q9HA82 394 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 DDX43Q9NXZ2 648 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 HMGXB4Q9UGU5 601 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 PUF60Q9UHX1 559 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 MYO6Q9UM54 1294 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CAPN11Q9UMQ6 739 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 STXBP5LQ9Y2K9 1186 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 PCDHB4Q9Y5E5 795 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CHD7Q9P2D1 2997 aa20.79■□□□□ 0.92
MAP1LC3A-203ENST00000397709 FOXN3O00409 490 aaPredicted RBP20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 GRM6O15303 877 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 HCRTO43612 131 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 TBC1D4O60343 1298 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CTSAP10619 480 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 DNAJB1P25685 340 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 LMO2P25791 158 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 NDST1P52848 882 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 GPM6BQ13491 265 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ZNF280DQ6N043 979 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ANKS3Q6ZW76 656 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 LNX1Q8TBB1 728 aaPredicted RBP20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 POF1BQ8WVV4 589 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ARNTL2Q8WYA1 636 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 RIN2Q8WYP3 895 aaPredicted RBP20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 SPAG5Q96R06 1193 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 TWNKQ96RR1 684 aa20.78■□□□□ 0.92
MAP1LC3A-203ENST00000397709 TRIOBPQ9H2D6 2365 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 EPOPA6NHQ4 379 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 A8MXQ7 604 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 H7C4K7 107 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 URODP06132 367 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 PNMA6AP0CW24 399 aaPredicted RBP20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 CASP14P31944 242 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 FXR1P51114 621 aaKnown RBP eCLIP20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 KIAA1841Q6NSI8 718 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 PDXDC1Q6P996 788 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 TMEM270Q6UE05 265 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 PPFIBP1Q86W92 1011 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 FAM71AQ8IYT1 594 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 THEM5Q8N1Q8 247 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 ELOVL4Q9GZR5 314 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 MTRRQ9UBK8 725 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 BACE2Q9Y5Z0 518 aa20.77■□□□□ 0.92
MAP1LC3A-203ENST00000397709 COL4A4P53420 1690 aaPredicted RBP20.77■□□□□ 0.91
MAP1LC3A-203ENST00000397709 TMEM265A0A087WTH1 108 aa20.76■□□□□ 0.91
MAP1LC3A-203ENST00000397709 LRRC53A6NM62 1247 aa20.76■□□□□ 0.91
MAP1LC3A-203ENST00000397709 FSCN2O14926 492 aa20.76■□□□□ 0.91
MAP1LC3A-203ENST00000397709 LILRB3O75022 631 aa20.76■□□□□ 0.91
MAP1LC3A-203ENST00000397709 KRT5P13647 590 aa20.76■□□□□ 0.91
MAP1LC3A-203ENST00000397709 PCSK1P29120 753 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms