RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CST8O60676 142 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 NRLP54845 237 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 NOMO3P69849 1222 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 POU5F1Q01860 360 aaKnown RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 ST6GALNAC4Q9H4F1 302 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 METTL5Q9NRN9 209 aaKnown RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 PCYOX1Q9UHG3 505 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 MYPNQ86TC9 1320 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 A0A087WZ62 844 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 FARP2O94887 1054 aaPredicted RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 ARIH2O95376 493 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 ITIH2P19823 946 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 POLR2BP30876 1174 aaKnown RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 GBP1P32455 592 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 SLC1A1P43005 524 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 GCLCP48506 637 aaPredicted RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 KRT81Q14533 505 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 HADHQ16836 314 aaKnown RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 FAXCQ5TGI0 409 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 GLIS1Q8NBF1 620 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 OLIG1Q8TAK6 271 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 FDXACB1Q9BRP7 624 aaPredicted RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 NTPCRQ9BSD7 190 aaKnown RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.03□□□□□ -0.64
CPSF1P1-201ENST00000397477 OGTO15294 1046 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 USP2O75604 605 aaPredicted RBP11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 MYBL1P10243 752 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 CA4P22748 312 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 YWHAGP61981 247 aaKnown RBP eCLIP11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 AUHQ13825 339 aaKnown RBP11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 TFDP1Q14186 410 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 HHATQ5VTY9 493 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 DENND1BQ6P3S1 775 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 PPP1R21Q6ZMI0 780 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 DPP9Q86TI2 863 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 MTFR1LQ9H019 292 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 GPATCH2LQ9NWQ4 482 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 PGAP2Q9UHJ9 254 aa11.02□□□□□ -0.64
CPSF1P1-201ENST00000397477 A0A0B4J269 797 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 GH1P01241 217 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 CALB1P05937 261 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 UNGP13051 313 aaPredicted RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 ATP5DP30049 168 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 RFC1P35251 1148 aaPredicted RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 MAGEA4P43358 317 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 CRELD2Q6UXH1 353 aaPredicted RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 ZBED3Q96IU2 234 aaPredicted RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 LBHD1Q9BQE6 289 aaPredicted RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 JPH2Q9BR39 696 aaPredicted RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 ADPGKQ9BRR6 497 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 COQ4Q9Y3A0 265 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 AGTP01019 485 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 DARS2Q6PI48 645 aaKnown RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 KIF2BQ8N4N8 673 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 TFAP2BQ92481 460 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 RBM41Q96IZ5 413 aaKnown RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 DHX33Q9H6R0 707 aaKnown RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 ARFGEF1Q9Y6D6 1849 aa11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 COL11A2P13942 1736 aaPredicted RBP11.02□□□□□ -0.65
CPSF1P1-201ENST00000397477 METTL7BQ6UX53 244 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 KAT2BQ92831 832 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 TGS1Q96RS0 853 aaKnown RBP11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 SMYD3Q9H7B4 428 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 KIF9Q9HAQ2 790 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 NINJ2Q9NZG7 142 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 COL4A5P29400 1685 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 FSCN2O14926 492 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 MAPK13O15264 365 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 NFICP08651 508 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 MAN1A1P33908 653 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 EFNA5P52803 228 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 FASTKD3Q14CZ7 662 aaKnown RBP11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 IER5Q5VY09 327 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 EXOC3L1Q86VI1 746 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 VSIG1Q86XK7 387 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 FAM71DQ8N9W8 422 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 JOSD2Q8TAC2 188 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 PYROXD1Q8WU10 500 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 DDX27Q96GQ7 796 aaKnown RBP11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 TACO1Q9BSH4 297 aaKnown RBP11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 RGS17Q9UGC6 210 aaPredicted RBP11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 SLC12A6Q9UHW9 1150 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 GRIN3BO60391 1043 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 TTC4O95801 387 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 PDGFRBP09619 1106 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 RFC5P40937 340 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 CDH6P55285 790 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 TRIM72Q6ZMU5 477 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 ACTL9Q8TC94 416 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 ART4Q93070 314 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
CPSF1P1-201ENST00000397477 FBXL18Q96ME1 805 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms