RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ELMSAN1Q6PJG2 1045 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 MAP4K3Q8IVH8 894 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 GPR65Q8IYL9 337 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 CCDC170Q8IYT3 715 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 ACRBPQ8NEB7 543 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 BAP1Q92560 729 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 ATOH1Q92858 354 aaPredicted RBP18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 B3GALT6Q96L58 329 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 GPR62Q9BZJ7 368 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 MMRN2Q9H8L6 949 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 KCNK12Q9HB15 430 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 WDR6Q9NNW5 1121 aaKnown RBP18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 DMAC2Q9NW81 257 aa18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 ZNHIT6Q9NWK9 470 aaKnown RBP18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 REXO2Q9Y3B8 237 aaKnown RBP18.8■□□□□ 0.6
TNFSF13-205ENST00000396545 CCDC195A0A1B0GUA6 201 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 LRRIQ4A6NIV6 560 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 AKAP3O75969 853 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 C1RP00736 705 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 TDGQ13569 410 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 FUT10Q6P4F1 479 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 ZNF662Q6ZS27 426 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 TMEM134Q9H6X4 195 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 AGPAT3Q9NRZ7 376 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 FAM207AQ9NSI2 230 aaPredicted RBP18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 ARMCX3Q9UH62 379 aaPredicted RBP18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 ADAM28Q9UKQ2 775 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 TBX20Q9UMR3 447 aa18.79■□□□□ 0.6
TNFSF13-205ENST00000396545 RIF1Q5UIP0 2472 aaKnown RBP18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 MAPK13O15264 365 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 RFPL2O75678 378 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 PSMC2P35998 433 aaKnown RBP18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 ARHGAP25P42331 645 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 CLCN5P51795 746 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 EFNA5P52803 228 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 KCNH2Q12809 1159 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 FAM187BQ17R55 369 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 USP41Q3LFD5 358 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 NEK11Q8NG66 645 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 HDAC7Q8WUI4 952 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 ZNF707Q96C28 371 aaPredicted RBP18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 BORCS6Q96GS4 357 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 MFSD1Q9H3U5 465 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 FZD8Q9H461 694 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 PRMT7Q9NVM4 692 aaPredicted RBP18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 KLK14Q9P0G3 267 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 DUSP12Q9UNI6 340 aa18.78■□□□□ 0.6
TNFSF13-205ENST00000396545 CLUHO75153 1309 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 A0A0U1RQJ8 604 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 KIAA0391O15091 583 aaKnown RBP18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 CYLC1P35663 651 aaPredicted RBP18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 GNG11P61952 73 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 CWF19L1Q69YN2 538 aaKnown RBP18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 PDXDC1Q6P996 788 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 DEPTORQ8TB45 409 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 ATRIPQ8WXE1 791 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 BSNDQ8WZ55 320 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 WDR24Q96S15 920 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 C2orf40Q9H1Z8 148 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 PLEKHA4Q9H4M7 779 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 CEP72Q9P209 647 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 FNIP2Q9P278 1114 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 IGSF9Q9P2J2 1179 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 PARP2Q9UGN5 583 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 FRMD4BQ9Y2L6 1034 aa18.77■□□□□ 0.6
TNFSF13-205ENST00000396545 TTLL13PA6NNM8 815 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 EIF3CLB5ME19 914 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 TGM5O43548 720 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 GFRA3O60609 400 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 NOL4O94818 638 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 SPATA31D3P0C874 917 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 STRN3Q13033 797 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 SPATA31D4Q6ZUB0 917 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 ZBTB8OSQ8IWT0 167 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 SMG7Q92540 1137 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 RABGGTAQ92696 567 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 EIF3CQ99613 913 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 PDZD7Q9H5P4 517 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 NHEJ1Q9H9Q4 299 aaPredicted RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 EPS15L1Q9UBC2 864 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 CACNG4Q9UBN1 327 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 DOCK8Q8NF50 2099 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 PROB1E7EW31 1015 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 CLIC2O15247 247 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 AFPP02771 609 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 CASQ1P31415 396 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 CASP4P49662 377 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 DPY19L2P1Q6NXN4 242 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 LILRA6Q6PI73 481 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 PALB2Q86YC2 1186 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 RIN2Q8WYP3 895 aaPredicted RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 SYN2Q92777 582 aaPredicted RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 PAAF1Q9BRP4 392 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 LSM14BQ9BX40 385 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 NUCKS1Q9H1E3 243 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 LZTFL1Q9NQ48 299 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 MYO1AQ9UBC5 1043 aa18.76■□□□□ 0.59
TNFSF13-205ENST00000396545 PTPRZ1P23471 2315 aaPredicted RBP18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 MTCL1Q9Y4B5 1905 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms