RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 OSBPL8Q9BZF1 889 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 NPHS2Q9NP85 383 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.83□□□□□ -0.84
NDE1-201ENST00000396354 PCDHA3Q9Y5H8 950 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 HLA-DRAP01903 254 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SSTR1P30872 391 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 POLGP54098 1239 aaPredicted RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 DCAF15Q66K64 600 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 DPY19L2Q6NUT2 758 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 ASAP3Q8TDY4 903 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 PPP1R13LQ8WUF5 828 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 GPRASP2Q96D09 838 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 PGM2Q96G03 612 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 PLVAPQ9BX97 442 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 TEX13BQ9BXU2 312 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SYNCQ9H7C4 482 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 PARP2Q9UGN5 583 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SUFUQ9UMX1 484 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SPATA31C2B4DYI2 1134 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 GRAP2O75791 330 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 GJB1P08034 283 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 NUDT17P0C025 328 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 FOXN2P32314 431 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 CPA2P48052 419 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 TFAMQ00059 246 aaKnown RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 PDIA2Q13087 525 aaKnown RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 CDO1Q16878 200 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 BBS9Q3SYG4 887 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 FAXCQ5TGI0 409 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 MIS18BP1Q6P0N0 1132 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 NETO2Q8NC67 525 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 C1orf131Q8NDD1 294 aaKnown RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 OR5B17Q8NGF7 314 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 NSUN6Q8TEA1 469 aaKnown RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 TMEM174Q8WUU8 243 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 ART4Q93070 314 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SENP7Q9BQF6 1050 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 POLR3FQ9H1D9 316 aaPredicted RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 METTL5Q9NRN9 209 aaKnown RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 ANKEF1Q9NU02 776 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 TJP2Q9UDY2 1190 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SIP14410 1827 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 E2F8A0AVK6 867 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 TTC4O95801 387 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 NCALDP61601 193 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SIX1Q15475 284 aaPredicted RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 ACAD10Q6JQN1 1059 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 YTHDF3Q7Z739 585 aaKnown RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 THNSL1Q8IYQ7 743 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SHC3Q92529 594 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 TXLNGYQ9BZA5 131 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 ACAD9Q9H845 621 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 MAP3K20Q9NYL2 800 aaKnown RBP9.82□□□□□ -0.84
NDE1-201ENST00000396354 SLC9A2Q9UBY0 812 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 PCYOX1Q9UHG3 505 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 GINS2Q9Y248 185 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 IVNS1ABPQ9Y6Y0 642 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 MGAMO43451 1857 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 MROH7Q68CQ1 1323 aa9.82□□□□□ -0.84
NDE1-201ENST00000396354 SOWAHBA6NEL2 793 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 SFNP31947 248 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 RPA3P35244 121 aaPredicted RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 MAGEA4P43358 317 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 BASP1P80723 227 aaKnown RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 HHATQ5VTY9 493 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 C11orf63Q6NUN7 778 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 MFSD7Q6UXD7 560 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 ZC3H18Q86VM9 953 aaKnown RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 MCOLN2Q8IZK6 566 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.81□□□□□ -0.84
NDE1-201ENST00000396354 CALN1Q9BXU9 219 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 STMN4Q9H169 189 aaPredicted RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 CYP26B1Q9NR63 512 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 MARCOQ9UEW3 520 aaPredicted RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 FBXO40Q9UH90 709 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 MAGED2Q9UNF1 606 aaPredicted RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 CCDC195A0A1B0GUA6 201 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 ARIH2O95376 493 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 KITP10721 976 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 PECAM1P16284 738 aaPredicted RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 RAP1GAPP47736 663 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 APOBEC3FQ8IUX4 373 aaKnown RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.81□□□□□ -0.84
NDE1-201ENST00000396354 DTX3LQ8TDB6 740 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 HSPH1Q92598 858 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 FGD4Q96M96 766 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 FBXL18Q96ME1 805 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 RUNDC3BQ96NL0 473 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 DCLK3Q9C098 648 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 TXNRD2Q9NNW7 524 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 GINM1Q9NU53 330 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 PIH1D1Q9NWS0 290 aaKnown RBP9.81□□□□□ -0.84
NDE1-201ENST00000396354 ARHGAP28Q9P2N2 729 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 NEU2Q9Y3R4 380 aa9.81□□□□□ -0.84
NDE1-201ENST00000396354 GLTPD2A6NH11 291 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 ATP2A1O14983 1001 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 NQO1P15559 274 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 UBA1P22314 1058 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 GTF2H1P32780 548 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms