RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 PHKBQ93100 1093 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CHP1Q99653 195 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TRAIPQ9BWF2 469 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NIFKQ9BYG3 293 aaKnown RBP12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FAM192AQ9GZU8 254 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ADAMTS10Q9H324 1103 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 STK39Q9UEW8 545 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CIDEBQ9UHD4 219 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PLAAQ9Y263 795 aa12.15□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FSCN2O14926 492 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FGF18O76093 207 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ACADSP16219 412 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 HPDP32754 393 aaPredicted RBP12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TUBP50607 506 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NLRP11P59045 1033 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ATP11AP98196 1134 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 KRT17Q04695 432 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 KLC1Q07866 573 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 OR52E8Q6IFG1 317 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 C8orf74Q6P047 294 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 MBOAT7Q96N66 472 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DNAJC7Q99615 494 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TLE6Q9H808 572 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CDHR5Q9HBB8 845 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 GALNT8Q9NY28 637 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ADAM22Q9P0K1 906 aa12.14□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RNF225M0QZC1 329 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PSMD10O75832 226 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FAM153BP0C7A2 387 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CCDC166P0CW27 439 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DARSP14868 501 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 XBP1P17861 261 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DNAJB1P25685 340 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 GPC3P51654 580 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NCALDP61601 193 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PRKCEQ02156 737 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 MPP3Q13368 585 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CUL4BQ13620 913 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DUSP6Q16828 381 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FAM153CQ494X1 144 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 KRT25Q7Z3Z0 450 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ZNF410Q86VK4 478 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ARHGAP18Q8N392 663 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NCSTNQ92542 709 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NDNQ99608 321 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 GCOM2Q9BZD3 368 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 VCX3BQ9H321 246 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 VCX3AQ9NNX9 186 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ARHGEF3Q9NR81 526 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TYW1Q9NV66 732 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RNF14Q9UBS8 474 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FAM153AQ9UHL3 310 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NFS1Q9Y697 457 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 A0A0U1RQF3 1178 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 E2F6O75461 281 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 VTNP04004 478 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 HOXB8P17481 243 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 IRS1P35568 1242 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 STAT6P42226 847 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NRIP1P48552 1158 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SH3BGRP55822 239 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 POLE2P56282 527 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SPAG1Q07617 926 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CBX2Q14781 532 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TARBP2Q15633 366 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 GALNTL6Q49A17 601 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TMEM154Q6P9G4 183 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 MIER3Q7Z3K6 550 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 BLIDQ8IZY5 108 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SMYD1Q8NB12 490 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CFAP61Q8NHU2 1237 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TBCKQ8TEA7 893 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ZNF558Q96NG5 402 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FAM129AQ9BZQ8 928 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CWH43Q9H720 699 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ZNF862O60290 1169 aa12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RARAP10276 462 aa12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 GBP1P32455 592 aa12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CYLC1P35663 651 aaPredicted RBP12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PAFAH1B1P43034 410 aa12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CLCN3P51790 818 aa12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 KCNJ2P63252 427 aa12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DLX2Q07687 328 aaPredicted RBP12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 BMP8AQ7Z5Y6 402 aa12.12□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ECHDC2Q86YB7 292 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms