RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 WDR49Q8IV35 697 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 SLC9A9Q8IVB4 645 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 RDH13Q8NBN7 331 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 OR10T2Q8NGX3 314 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 ZNF461Q8TAF7 563 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 SPATA20Q8TB22 786 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 ERCC4Q92889 916 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 ZNF560Q96MR9 790 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 TMEM209Q96SK2 561 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 CGRRF1Q99675 332 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 WDR6Q9NNW5 1121 aaKnown RBP12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 CHMP5Q9NZZ3 219 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 ITGA11Q9UKX5 1188 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 COL4A2P08572 1712 aa12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 HELZP42694 1942 aaKnown RBP12.45□□□□□ -0.42
APOBEC3F-202ENST00000381565 ARHGEF37A1IGU5 675 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 GOLGA6L4A6NEF3 574 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 CCL16O15467 120 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 NR3C1P04150 777 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 POU2F2P09086 479 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 HNRNPA1P09651 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 TMEM191BP0C7N4 346 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 ATF2P15336 505 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 PAX3P23760 479 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 CASP4P49662 377 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 ARPP19P56211 112 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 SV2CQ496J9 727 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 ZCWPW2Q504Y3 356 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 PPM1LQ5SGD2 360 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 RNF19BQ6ZMZ0 732 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 TCEAL8Q8IYN2 117 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 SMYD4Q8IYR2 804 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 GUF1Q8N442 669 aaKnown RBP12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 LRRC52Q8N7C0 313 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 TDRD5Q8NAT2 981 aaKnown RBP12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 GOLGA5Q8TBA6 731 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 CACTINQ8WUQ7 758 aaKnown RBP12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 TIGD1Q96MW7 591 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 CRISPLD1Q9H336 500 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 HCFC1R1Q9NWW0 138 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 L1RE1Q9UN81 338 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 AGAP1Q9UPQ3 857 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 SORCS3Q9UPU3 1222 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 MAPK8IP1Q9UQF2 711 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 TRAF3IP3Q9Y228 551 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 USTQ9Y2C2 406 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 NR2E1Q9Y466 385 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 DNAH14Q0VDD8 3507 aa12.44□□□□□ -0.42
APOBEC3F-202ENST00000381565 PRR23AA6NEV1 266 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 CYB561D2O14569 222 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 EXOC3O60645 756 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 ASGR2P07307 311 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 CPB1P15086 417 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 PNPLA4P41247 253 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 NBL1P41271 181 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 NTHL1P78549 312 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 BFSP1Q12934 665 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 MTMR3Q13615 1198 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 SURF1Q15526 300 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 WSCD1Q658N2 575 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 TPGS2Q68CL5 300 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 GRASPQ7Z6J2 395 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 USP37Q86T82 979 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 CSGALNACT2Q8N6G5 542 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 ANKRD36BP1Q96IX9 119 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 MYADMQ96S97 322 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 AFF4Q9UHB7 1163 aaKnown RBP12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 INSL5Q9Y5Q6 135 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 GVINP1Q7Z2Y8 2422 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 ZNF292O60281 2723 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 RIF1Q5UIP0 2472 aaKnown RBP12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 DMXL1Q9Y485 3027 aa12.43□□□□□ -0.42
APOBEC3F-202ENST00000381565 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 MTMR11A4FU01 709 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 OR6C75A6NL08 312 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 LRRIQ3A6PVS8 624 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 TULP1O00294 542 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 NRG2O14511 850 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 TNNC2P02585 160 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 KRT19P08727 400 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 CLDN10P78369 228 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 ADCY1Q08828 1119 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 GPR17Q13304 367 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 MYBPC2Q14324 1141 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 NFIL3Q16649 462 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 UVSSAQ2YD98 709 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 C1orf220Q5T0J3 134 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 TRAPPC11Q7Z392 1133 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 LIMS2Q7Z4I7 341 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 OSTM1Q86WC4 334 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 UBALD2Q8IYN6 164 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 ZDHHC14Q8IZN3 488 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 PDCL2Q8N4E4 241 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 TTC9BQ8N6N2 239 aa12.42□□□□□ -0.42
APOBEC3F-202ENST00000381565 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms