RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GRK7Q8WTQ7 553 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 AFG1LQ8WV93 481 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 FMO2Q99518 471 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 TRIM51Q9BSJ1 452 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 C16orf70Q9BSU1 422 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 NEUROG2Q9H2A3 272 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 DPH5Q9H2P9 285 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 VRTNQ9H8Y1 702 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 IFT122Q9HBG6 1241 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 MTRF1LQ9UGC7 380 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 CHORDC1Q9UHD1 332 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 FEZ2Q9UHY8 353 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 STRIP2Q9ULQ0 834 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 PLAAQ9Y263 795 aa11.12□□□□□ -0.63
POLR2J3-201ENST00000379340 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 SLC15A5A6NIM6 579 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 B4GALT5O43286 388 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 SHOX2O60902 331 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 SNAI1O95863 264 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 CALCAP01258 141 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 IVLP07476 585 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 P4HA1P13674 534 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 POLR2BP30876 1174 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ADCYAP1R1P41586 468 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ASPAP45381 313 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 IGBP1P78318 339 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 SKOR1P84550 965 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 SIX1Q15475 284 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 AMHR2Q16671 573 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ZNF667Q5HYK9 610 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 EMC10Q5UCC4 262 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 MMS22LQ6ZRQ5 1243 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ADAT2Q7Z6V5 191 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 CROCCP2Q86T23 111 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 CCDC105Q8IYK2 499 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 DDX27Q96GQ7 796 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 MAML3Q96JK9 1138 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 BCO2Q9BYV7 579 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 XYLT2Q9H1B5 865 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 PDZD7Q9H5P4 517 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 MINDY3Q9H8M7 445 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ZDHHC18Q9NUE0 388 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 AKT3Q9Y243 479 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 RALGAPA2Q2PPJ7 1873 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 A0A087WZ62 844 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 FAM170AA1A519 330 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 H3BRB1 525 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 TLR3O15455 904 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ECEL1O95672 775 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 STAU1O95793 577 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 MMP3P08254 477 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 STAG3L1P0CL83 205 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 CXCL8P10145 99 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 RARAP10276 462 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 GSCP56915 257 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 PCBP1Q15365 356 aaKnown RBP eCLIP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 DGKDQ16760 1214 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 DCAF4L1Q3SXM0 396 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 SGO2Q562F6 1265 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 TTMPQ5BVD1 217 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 AADACL2Q6P093 401 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 PASD1Q8IV76 773 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 OR6J1Q8NGC5 347 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 EXD1Q8NHP7 514 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 C18orf8Q96DM3 657 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ATP6V1G3Q96LB4 118 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 FDXACB1Q9BRP7 624 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 ADPGKQ9BRR6 497 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 TINF2Q9BSI4 451 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 TXLNGYQ9BZA5 131 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 LHX5Q9H2C1 402 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 TUT1Q9H6E5 874 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 TMBIM4Q9HC24 238 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 CWC15Q9P013 229 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
POLR2J3-201ENST00000379340 MGAMO43451 1857 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 TMEM191CA6NGB0 347 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 GJB1P08034 283 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 MYZAPP0CAP1 466 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 CCL5P13501 91 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 CD58P19256 250 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 DHX9Q08211 1270 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 ACVR2BQ13705 512 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 SLMAPQ14BN4 828 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 GRIK4Q16099 956 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 UAP1Q16222 522 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 CEP85LQ5SZL2 805 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 AGBL2Q5U5Z8 902 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 DNAJC24Q6P3W2 148 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 TTC27Q6P3X3 843 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 KDM7AQ6ZMT4 941 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 C3orf20Q8ND61 904 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 UBLCP1Q8WVY7 318 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 ARL8AQ96BM9 186 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms