RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 XYLBO75191 536 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 FSHRP23945 695 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 POLR2BP30876 1174 aaKnown RBP18.32■□□□□ 0.52
RER1-202ENST00000378512 CLDN10P78369 228 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 FAM160A1Q05DH4 1040 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 HTR4Q13639 388 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 NFIL3Q16649 462 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 RNF19BQ6ZMZ0 732 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 LIMS2Q7Z4I7 341 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 USP37Q86T82 979 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 ITFG1Q8TB96 612 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 TIGD1Q96MW7 591 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.32■□□□□ 0.523e-9■■□□□ 13.9
RER1-202ENST00000378512 POLIQ9UNA4 740 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 AGAP1Q9UPQ3 857 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 TRAF3IP3Q9Y228 551 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 NUMBLQ9Y6R0 609 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 CYP2J2P51589 502 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 CLCN5P51795 746 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 ADCY1Q08828 1119 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 DUOXA2Q1HG44 320 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 PARM1Q6UWI2 310 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 ELOA2Q8IYF1 753 aaPredicted RBP18.32■□□□□ 0.52
RER1-202ENST00000378512 GUF1Q8N442 669 aaKnown RBP18.32■□□□□ 0.52
RER1-202ENST00000378512 CSGALNACT2Q8N6G5 542 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 OR10T2Q8NGX3 314 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 ANKRD36BP1Q96IX9 119 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 DNMT3BQ9UBC3 853 aaKnown RBP18.32■□□□□ 0.52
RER1-202ENST00000378512 HSFX1Q9UBD0 423 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 INSL5Q9Y5Q6 135 aa18.32■□□□□ 0.52
RER1-202ENST00000378512 ZFP37Q9Y6Q3 630 aaPredicted RBP18.32■□□□□ 0.52
RER1-202ENST00000378512 VPS13AQ96RL7 3174 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 ANHXE9PGG2 379 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 PRPF40AO75400 957 aaKnown RBP18.31■□□□□ 0.52
RER1-202ENST00000378512 TMEM191BP0C7N4 346 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 CPB1P15086 417 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 AOC1P19801 751 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 ARPP19P56211 112 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
RER1-202ENST00000378512 RBP5P82980 135 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 LMBRD2Q68DH5 695 aaPredicted RBP18.31■□□□□ 0.52
RER1-202ENST00000378512 POTEHQ6S545 545 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 RDH13Q8NBN7 331 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 SPATA18Q8TC71 538 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 GPR152Q8TDT2 470 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 ZNF516Q92618 1163 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 FGF14Q92915 247 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 CCDC47Q96A33 483 aaKnown RBP18.31■□□□□ 0.52
RER1-202ENST00000378512 CCDC34Q96HJ3 373 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 CGRRF1Q99675 332 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 ZCWPW1Q9H0M4 648 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 CRISPLD1Q9H336 500 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 CYP4F11Q9HBI6 524 aa18.31■□□□□ 0.52
RER1-202ENST00000378512 ZFHX2Q9C0A1 2572 aaPredicted RBP18.31■□□□□ 0.52
RER1-202ENST00000378512 GOLGA6L4A6NEF3 574 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 KIF20AO95235 890 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 OR4Q2P0C623 313 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 ELF1P32519 619 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 COBLL1Q53SF7 1204 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 WSCD1Q658N2 575 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 CENPPQ6IPU0 288 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 TRAPPC11Q7Z392 1133 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 PLEKHO2Q8TD55 490 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 PARD3BQ8TEW8 1205 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 NOC3LQ8WTT2 800 aaKnown RBP18.3■□□□□ 0.52
RER1-202ENST00000378512 TMEM209Q96SK2 561 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 L1RE1Q9UN81 338 aa18.3■□□□□ 0.52
RER1-202ENST00000378512 MTMR11A4FU01 709 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 PRRG1O14668 218 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 MAPK13O15264 365 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 GFRA3O60609 400 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 EXOC3O60645 756 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 SRFP11831 508 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 EPHA5P54756 1037 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 PNOCQ13519 176 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 ZCWPW2Q504Y3 356 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 DPH6Q7L8W6 267 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 TMEM86AQ8N2M4 240 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 PDCL2Q8N4E4 241 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 ING5Q8WYH8 240 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 FGF13Q92913 245 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 NXPE3Q969Y0 559 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 GSDMAQ96QA5 445 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 CDH7Q9ULB5 785 aa18.29■□□□□ 0.52
RER1-202ENST00000378512 PTPRDP23468 1912 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 DENND4CQ5VZ89 1909 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 NRG2O14511 850 aaPredicted RBP18.28■□□□□ 0.52
RER1-202ENST00000378512 GABRDO14764 452 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 MICAL2O94851 1124 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 STAU1O95793 577 aaKnown RBP18.28■□□□□ 0.52
RER1-202ENST00000378512 TNNC2P02585 160 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 LRG1P02750 347 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 NR3C1P04150 777 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 PTPN2P17706 415 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 NUBP1P53384 320 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 SMARCB1Q12824 385 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 PABPC1LQ4VXU2 614 aaKnown RBP18.28■□□□□ 0.52
RER1-202ENST00000378512 PRSS36Q5K4E3 855 aa18.28■□□□□ 0.52
RER1-202ENST00000378512 ASCL5Q7RTU5 278 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms