RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ERLIN2O94905 339 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 VNN1O95497 513 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 RXRBP28702 533 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 IFNAR2P48551 515 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 GMPSP49915 693 aaPredicted RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 PDE6CP51160 858 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 CDR2Q01850 454 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 CETN1Q12798 172 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 LRRC14Q15048 493 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 LONRF1Q17RB8 773 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 TTC31Q49AM3 519 aaPredicted RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 TDRD10Q5VZ19 366 aaKnown RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 C11orf63Q6NUN7 778 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 EEPD1Q7L9B9 569 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 VSIG10LQ86VR7 867 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 CDR2LQ86X02 465 aaPredicted RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 SLC13A5Q86YT5 568 aaPredicted RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 C12orf56Q8IXR9 622 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 GLIS1Q8NBF1 620 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 AGBL3Q8NEM8 1001 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 TTC8Q8TAM2 541 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 NEK9Q8TD19 979 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 TRPM4Q8TD43 1214 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 ASAP3Q8TDY4 903 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 PSPC1Q8WXF1 523 aaKnown RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 WRNIP1Q96S55 665 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 SELENOSQ9BQE4 189 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 NIF3L1Q9GZT8 377 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 CCDC113Q9H0I3 377 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 POLR3FQ9H1D9 316 aaPredicted RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 APOBEC3GQ9HC16 384 aaKnown RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 ZNF214Q9UL59 606 aaPredicted RBP6.79□□□□□ -1.32
CHD6-202ENST00000373222 PCDHA10Q9Y5I2 948 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 CAPN7Q9Y6W3 813 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 MYPNQ86TC9 1320 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 SYNGAP1Q96PV0 1343 aa6.79□□□□□ -1.32
CHD6-202ENST00000373222 GOLGA6L10A0A0M3HER8 536 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 PI4K2BG5E9Z4 385 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 DNM1LO00429 736 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TRAPPC3O43617 180 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 LYPLA2O95372 231 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 FAM107AO95990 144 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CYP1A2P05177 515 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CCDC172P0C7W6 258 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CHN1P15882 459 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TNNI1P19237 187 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CD58P19256 250 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 COILP38432 576 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 GCGRP47871 477 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 GPC3P51654 580 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 MFAP3P55082 362 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TAS2R40P59535 323 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 ACTR2P61160 394 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 NFX1Q12986 1120 aaKnown RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 TRAF1Q13077 416 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 MTM1Q13496 603 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 HP1BP3Q5SSJ5 553 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 ACBD5Q5T8D3 534 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 EMC10Q5UCC4 262 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 FKBP1CQ5VVH2 108 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 ERAP2Q6P179 960 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 POTEAQ6S8J7 498 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CRELD2Q6UXH1 353 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 NLRX1Q86UT6 975 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 EFCAB13Q8IY85 973 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 MYO1HQ8N1T3 1032 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 UBL4BQ8N7F7 174 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 REPS2Q8NFH8 660 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 OR5B17Q8NGF7 314 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 IPO4Q8TEX9 1081 aaKnown RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 ALKBH8Q96BT7 664 aaKnown RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 NT5C1BQ96P26 610 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 C11orf70Q9BRQ4 267 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 OSBPL7Q9BZF2 842 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 RAB17Q9H0T7 212 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 PABPC3Q9H361 631 aaKnown RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 IL21Q9HBE4 155 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TMEM8AQ9HCN3 771 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 A1CFQ9NQ94 594 aaKnown RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 RGS17Q9UGC6 210 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 TRIP11Q15643 1979 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 ATP8B3O60423 1300 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 A0A087WUV0 522 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 CCDC163A0A0D9SF12 145 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 GMNCA6NCL1 334 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 MEFVO15553 781 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 PIAS1O75925 651 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CETPP11597 493 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CTHP32929 405 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TNFSF9P41273 254 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 FNTAP49354 379 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 HADHBP55084 474 aaKnown RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 KRT17Q04695 432 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 BIRC3Q13489 604 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CLEC16AQ2KHT3 1053 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 GRAMD1BQ3KR37 738 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TMEM63BQ5T3F8 832 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 SEL1L2Q5TEA6 688 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TXNRD3NBQ6F5E7 133 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 NIPA1Q7RTP0 329 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms