RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 C1orf131Q8NDD1 294 aaKnown RBP13.6□□□□□ -0.23
GPC3-201ENST00000370818 MICAL1Q8TDZ2 1067 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 WHAMMQ8TF30 809 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 ATP6V1G3Q96LB4 118 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 PPP1R16BQ96T49 567 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 FDXACB1Q9BRP7 624 aaPredicted RBP13.6□□□□□ -0.23
GPC3-201ENST00000370818 MAGEB2O15479 319 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 CXCL8P10145 99 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 MAPK4P31152 587 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 PTP4A2Q12974 167 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 FAM187BQ17R55 369 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 SGSM1Q2NKQ1 1148 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 TRIM72Q6ZMU5 477 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 DPP9Q86TI2 863 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
GPC3-201ENST00000370818 PRELID2Q8N945 189 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.6□□□□□ -0.23
GPC3-201ENST00000370818 TRIM11Q96F44 468 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 C11orf70Q9BRQ4 267 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 NIF3L1Q9GZT8 377 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 EBF2Q9HAK2 575 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
GPC3-201ENST00000370818 GOLGA6L10A0A0M3HER8 536 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 TCRBV7S2A1N4TA0A589 114 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 H3BRB1 525 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 DAPK3O43293 454 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 THAP12O43422 761 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 VTNP04004 478 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 PHKA2P46019 1235 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.233e-11■□□□□ 10.6
GPC3-201ENST00000370818 CLUL1Q15846 466 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 FAM110CQ1W6H9 321 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 C3orf20Q8ND61 904 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 NSMCE1Q8WV22 266 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 PARK7Q99497 189 aaKnown RBP13.59□□□□□ -0.23
GPC3-201ENST00000370818 TRIM51Q9BSJ1 452 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 TUT1Q9H6E5 874 aaKnown RBP13.59□□□□□ -0.23
GPC3-201ENST00000370818 NOD2Q9HC29 1040 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 ADCY6O43306 1168 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 CELF2O95319 508 aaKnown RBP13.59□□□□□ -0.23
GPC3-201ENST00000370818 ATP6V1G2O95670 118 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 TMEM191BP0C7N4 346 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 HOXD8P13378 290 aaPredicted RBP13.59□□□□□ -0.23
GPC3-201ENST00000370818 CD58P19256 250 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 ASPAP45381 313 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 TRPC3Q13507 836 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 QPCTQ16769 361 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 MTHFD1LQ6UB35 978 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 PHF13Q86YI8 300 aaPredicted RBP13.59□□□□□ -0.23
GPC3-201ENST00000370818 TMEM130Q8N3G9 435 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 THOC1Q96FV9 657 aaKnown RBP13.59□□□□□ -0.23
GPC3-201ENST00000370818 CISHQ9NSE2 258 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 ADAM22Q9P0K1 906 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 AKT3Q9Y243 479 aa13.59□□□□□ -0.23
GPC3-201ENST00000370818 EVPLQ92817 2033 aa13.58□□□□□ -0.23
GPC3-201ENST00000370818 WEE2P0C1S8 567 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 RWDD2BP57060 319 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 ELF3P78545 371 aaPredicted RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 DR1Q01658 176 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 MAMLD1Q13495 774 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 BYSLQ13895 437 aaKnown RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 SIX1Q15475 284 aaPredicted RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 MARCH8Q5T0T0 291 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 SEL1L2Q5TEA6 688 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 BZW1Q7L1Q6 419 aaKnown RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 TAX1BP1Q86VP1 789 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 C18orf8Q96DM3 657 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 TBC1D31Q96DN5 1066 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 STAMBPL1Q96FJ0 436 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 VCPIP1Q96JH7 1222 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 TINF2Q9BSI4 451 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 RPF1Q9H9Y2 349 aaKnown RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 SIX4Q9UIU6 781 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 COL1A2P08123 1366 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 HMGB1P1B2RPK0 211 aaPredicted RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 DNAJC8O75937 253 aaPredicted RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 MMP3P08254 477 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 NFICP08651 508 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 HSPA6P17066 643 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 HSPA9P38646 679 aaKnown RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 PEX19P40855 299 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 ACVR2BQ13705 512 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 ZNF699Q32M78 642 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 ZNF394Q53GI3 561 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 PLEKHA7Q6IQ23 1121 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 TTC27Q6P3X3 843 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 SLC13A5Q86YT5 568 aaPredicted RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 C2orf69Q8N8R5 385 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 ANKRD36BP1Q96IX9 119 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 CPB2Q96IY4 423 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 SEC16BQ96JE7 1060 aa13.58□□□□□ -0.24
GPC3-201ENST00000370818 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms