RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 FCGRTP55899 365 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 DCAF4L1Q3SXM0 396 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 HIPK4Q8NE63 616 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.92□□□□□ -0.346e-7■■□□□ 14
PTPRK-203ENST00000368207 RMDN1Q96DB5 314 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 PABPC5Q96DU9 382 aaKnown RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 TRIM62Q9BVG3 475 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 VIPAS39Q9H9C1 493 aa12.92□□□□□ -0.34
PTPRK-203ENST00000368207 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
PTPRK-203ENST00000368207 CDH16O75309 829 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 PPP1R37O75864 691 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 FAM200BP0CF97 657 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 MYBPC2Q14324 1141 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 MGAT5BQ3V5L5 792 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 ACCSLQ4AC99 568 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 C1orf186Q6ZWK4 172 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 ARHGEF19Q8IW93 802 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 EMC1Q8N766 993 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 CEP120Q8N960 986 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 FAM71DQ8N9W8 422 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 CDC26Q8NHZ8 85 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 PPWD1Q96BP3 646 aaKnown RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 ACTR5Q9H9F9 607 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 EEF2KO00418 725 aaKnown RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 ZC3H11AO75152 810 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 RPSAP08865 295 aaKnown RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 GZMAP12544 262 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 MX2P20592 715 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 LRGUKQ96M69 825 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 ZNF512Q96ME7 567 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 GTSE1Q9NYZ3 720 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 FAXCQ5TGI0 409 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 RASSF3Q86WH2 238 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 ELMOD1Q8N336 334 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 SCG3Q8WXD2 468 aaKnown RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 RUBCNQ92622 972 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 KLF6Q99612 283 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 MAGEB5Q9BZ81 275 aa12.91□□□□□ -0.34
PTPRK-203ENST00000368207 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-203ENST00000368207 UBA6A0AVT1 1052 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 ITGB5P18084 799 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 TAC1P20366 129 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 ACADSBP45954 432 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 PPATQ06203 517 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 CBWD6Q4V339 395 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 CBWD3Q5JTY5 395 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 CBWD5Q5RIA9 395 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 PAPD7Q5XG87 772 aaKnown RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 TRMT10CQ7L0Y3 403 aaKnown RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 RNF180Q86T96 592 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 AGR3Q8TD06 166 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 TRPM4Q8TD43 1214 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 GANCQ8TET4 914 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 DNAJC19Q96DA6 116 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 ANKRD63C9JTQ0 380 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 DCTN3O75935 186 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 ART3Q13508 389 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 CCDC33Q8N5R6 958 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 RRAGCQ9HB90 399 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 ABI2Q9NYB9 513 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 GOLGA8QA0A0J9YX86 632 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 GOLGA8OA6NCC3 632 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 GOLGA8NF8WBI6 632 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 ATP9AO75110 1047 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 PNPLA4P41247 253 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 MAGEA4P43358 317 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 EFHC1Q5JVL4 640 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 HABP4Q5JVS0 413 aaKnown RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 CASKIN2Q8WXE0 1202 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 CYP39A1Q9NYL5 469 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 AIPL1Q9NZN9 384 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 GGT7Q9UJ14 662 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 MAPK7Q13164 816 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 CATSPERGQ6ZRH7 1159 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 PPP1R13LQ8WUF5 828 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 COPS5Q92905 334 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 MMTAG2Q9BU76 263 aaKnown RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 TRPC7Q9HCX4 862 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 BAG5Q9UL15 447 aa12.9□□□□□ -0.34
PTPRK-203ENST00000368207 APOBEC2Q9Y235 224 aaKnown RBP12.9□□□□□ -0.34
PTPRK-203ENST00000368207 LRRC10BA6NIK2 292 aa12.89□□□□□ -0.35
PTPRK-203ENST00000368207 C3orf70A6NLC5 250 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-203ENST00000368207 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
PTPRK-203ENST00000368207 TCP11X1B4DZS4 312 aa12.89□□□□□ -0.35
PTPRK-203ENST00000368207 TMTC4Q5T4D3 741 aa12.89□□□□□ -0.35
PTPRK-203ENST00000368207 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
PTPRK-203ENST00000368207 GPATCH2LQ9NWQ4 482 aa12.89□□□□□ -0.35
PTPRK-203ENST00000368207 DDIT4Q9NX09 232 aa12.89□□□□□ -0.35
PTPRK-203ENST00000368207 LMCD1Q9NZU5 365 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms