RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SYCP3Q8IZU3 236 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 ATAD1Q8NBU5 361 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 SHKBP1Q8TBC3 707 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 SPPL2BQ8TCT7 592 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 CSGALNACT1Q8TDX6 532 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
CTSD-202ENST00000367196 CLIC6Q96NY7 704 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 SEPT5Q99719 369 aaPredicted RBP16.02■□□□□ 0.16
CTSD-202ENST00000367196 ZCWPW1Q9H0M4 648 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 TMEM206Q9H813 350 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 MTF2Q9Y483 593 aaPredicted RBP16.02■□□□□ 0.16
CTSD-202ENST00000367196 PCDHGA2Q9Y5H1 932 aa16.02■□□□□ 0.16
CTSD-202ENST00000367196 SCN1AP35498 2009 aa16.02■□□□□ 0.15
CTSD-202ENST00000367196 F5P12259 2224 aa16.02■□□□□ 0.15
CTSD-202ENST00000367196 MYMKA6NI61 221 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 HEPACAM2A8MVW5 462 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 TISP43B9A030 160 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 VNN2O95498 520 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 GJA1P17302 382 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 GARTP22102 1010 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 CDC25CP30307 473 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 MLLT6P55198 1093 aaPredicted RBP16.01■□□□□ 0.15
CTSD-202ENST00000367196 SLC39A14Q15043 492 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 MGAT5BQ3V5L5 792 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 DCP1BQ8IZD4 617 aaKnown RBP16.01■□□□□ 0.15
CTSD-202ENST00000367196 TMEM130Q8N3G9 435 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 OR10T2Q8NGX3 314 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 ATRIPQ8WXE1 791 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 DNAJC19Q96DA6 116 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 ZSWIM3Q96MP5 696 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 STRA6Q9BX79 667 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 LRRC3Q9BY71 257 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 FAM126AQ9BYI3 521 aaPredicted RBP16.01■□□□□ 0.15
CTSD-202ENST00000367196 DNAJC25Q9H1X3 360 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 ATXN3LQ9H3M9 355 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 SLC27A5Q9Y2P5 690 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 PIAS3Q9Y6X2 628 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 EP300Q09472 2414 aaPredicted RBP16.01■□□□□ 0.15
CTSD-202ENST00000367196 SPTBN4Q9H254 2564 aa16.01■□□□□ 0.15
CTSD-202ENST00000367196 COL4A2P08572 1712 aa16■□□□□ 0.15
CTSD-202ENST00000367196 COL4A3Q01955 1670 aa16■□□□□ 0.15
CTSD-202ENST00000367196 FRMD3A2A2Y4 597 aa16■□□□□ 0.15
CTSD-202ENST00000367196 KPNA7A9QM74 516 aa16■□□□□ 0.15
CTSD-202ENST00000367196 K7ELQ4 463 aaPredicted RBP16■□□□□ 0.15
CTSD-202ENST00000367196 KIAA0391O15091 583 aaKnown RBP16■□□□□ 0.15
CTSD-202ENST00000367196 CHADO15335 359 aa16■□□□□ 0.15
CTSD-202ENST00000367196 STX6O43752 255 aa16■□□□□ 0.15
CTSD-202ENST00000367196 ADSSP30520 456 aa16■□□□□ 0.15
CTSD-202ENST00000367196 VIPR2P41587 438 aa16■□□□□ 0.15
CTSD-202ENST00000367196 TSPY1Q01534 308 aa16■□□□□ 0.15
CTSD-202ENST00000367196 CSTF1Q05048 431 aaKnown RBP16■□□□□ 0.15
CTSD-202ENST00000367196 STK38Q15208 465 aa16■□□□□ 0.15
CTSD-202ENST00000367196 POTEHQ6S545 545 aa16■□□□□ 0.15
CTSD-202ENST00000367196 CRELD2Q6UXH1 353 aaPredicted RBP16■□□□□ 0.15
CTSD-202ENST00000367196 DNAJB7Q7Z6W7 309 aaPredicted RBP16■□□□□ 0.15
CTSD-202ENST00000367196 BRSK2Q8IWQ3 736 aa16■□□□□ 0.15
CTSD-202ENST00000367196 CCDC65Q8IXS2 484 aa16■□□□□ 0.15
CTSD-202ENST00000367196 EFCAB13Q8IY85 973 aa16■□□□□ 0.15
CTSD-202ENST00000367196 FAM3CQ92520 227 aa16■□□□□ 0.15
CTSD-202ENST00000367196 RUBCNQ92622 972 aa16■□□□□ 0.15
CTSD-202ENST00000367196 SECISBP2LQ93073 1101 aaKnown RBP16■□□□□ 0.15
CTSD-202ENST00000367196 FAM213AQ9BRX8 229 aa16■□□□□ 0.15
CTSD-202ENST00000367196 CUEDC2Q9H467 287 aa16■□□□□ 0.15
CTSD-202ENST00000367196 C8orf33Q9H7E9 229 aaPredicted RBP16■□□□□ 0.15
CTSD-202ENST00000367196 PANK4Q9NVE7 773 aa16■□□□□ 0.15
CTSD-202ENST00000367196 OBP2AQ9NY56 170 aa16■□□□□ 0.15
CTSD-202ENST00000367196 RBAKQ9NYW8 714 aaPredicted RBP16■□□□□ 0.15
CTSD-202ENST00000367196 NDRG2Q9UN36 371 aaKnown RBP16■□□□□ 0.15
CTSD-202ENST00000367196 MTMR6Q9Y217 621 aa16■□□□□ 0.15
CTSD-202ENST00000367196 R3HCC1Q9Y3T6 440 aaKnown RBP16■□□□□ 0.15
CTSD-202ENST00000367196 PDIA4P13667 645 aaKnown RBP15.99■□□□□ 0.15
CTSD-202ENST00000367196 GABRR2P28476 465 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 NASPP49321 788 aaPredicted RBP15.99■□□□□ 0.15
CTSD-202ENST00000367196 TFAMQ00059 246 aaKnown RBP15.99■□□□□ 0.15
CTSD-202ENST00000367196 FCHO2Q0JRZ9 810 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 GPR158Q5T848 1215 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 FAM173BQ6P4H8 233 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 ARID3BQ8IVW6 561 aaPredicted RBP15.99■□□□□ 0.15
CTSD-202ENST00000367196 MAML2Q8IZL2 1156 aaPredicted RBP15.99■□□□□ 0.15
CTSD-202ENST00000367196 SPATA18Q8TC71 538 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 USP28Q96RU2 1077 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 TMEM209Q96SK2 561 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 TNMDQ9H2S6 317 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 CHRDQ9H2X0 955 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 PRMT8Q9NR22 394 aaPredicted RBP15.99■□□□□ 0.15
CTSD-202ENST00000367196 ZSCAN32Q9NX65 697 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 TBC1D7Q9P0N9 293 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 ITGA11Q9UKX5 1188 aa15.99■□□□□ 0.15
CTSD-202ENST00000367196 TULP1O00294 542 aaPredicted RBP15.98■□□□□ 0.15
CTSD-202ENST00000367196 EXTL3O43909 919 aa15.98■□□□□ 0.15
CTSD-202ENST00000367196 HUS1O60921 280 aa15.98■□□□□ 0.15
CTSD-202ENST00000367196 WEE1P30291 646 aa15.98■□□□□ 0.15
CTSD-202ENST00000367196 ID4P47928 161 aa15.98■□□□□ 0.15
CTSD-202ENST00000367196 CCR3P51677 355 aa15.98■□□□□ 0.15
CTSD-202ENST00000367196 KPNA1P52294 538 aaPredicted RBP15.98■□□□□ 0.15
CTSD-202ENST00000367196 NRLP54845 237 aa15.98■□□□□ 0.15
CTSD-202ENST00000367196 PLCB2Q00722 1185 aa15.98■□□□□ 0.15
CTSD-202ENST00000367196 AMPD3Q01432 767 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms