RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NCAM1P13591 858 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 PPIL2Q13356 520 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 FASTKD1Q53R41 847 aaKnown RBP14.11□□□□□ -0.15
LDB3-202ENST00000361373 NAPEPLDQ6IQ20 393 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 CBWD2Q8IUF1 395 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 SPATA18Q8TC71 538 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 PABPC5Q96DU9 382 aaKnown RBP14.11□□□□□ -0.15
LDB3-202ENST00000361373 BTBD6Q96KE9 485 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 STARD7Q9NQZ5 370 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 L3MBTL1Q9Y468 752 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 HIST1H2AGP0C0S8 130 aaPredicted RBP14.11□□□□□ -0.15
LDB3-202ENST00000361373 RBP3P10745 1247 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 HIST1H2ADP20671 130 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 PON1P27169 355 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 RAD9BQ6WBX8 426 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 NT5DC4Q86YG4 428 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 HIST1H2AHQ96KK5 128 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 HIST1H2AJQ99878 128 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 H2AFJQ9BTM1 129 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 MUC3BQ9H195 1237 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 CYP3A4P08684 503 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 BCAT1P54687 386 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 SLC5A5Q92911 643 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 PBXIP1Q96AQ6 731 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 TBC1D12O60347 775 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 RALBP11234 206 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 MTA1Q13330 715 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 PDCLQ13371 301 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 C10orf120Q5SQS8 335 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 IQSEC1Q6DN90 963 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 ZPBP2Q6X784 338 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 LINC00523Q86TU6 105 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 PI4K2AQ9BTU6 479 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 VPS9D1Q9Y2B5 631 aa14.11□□□□□ -0.15
LDB3-202ENST00000361373 RSPH10B2B2RC85 870 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 CST8O60676 142 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 RSPH10BP0C881 870 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 SETSIPP0DME0 302 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 BRD2P25440 801 aaKnown RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 ALDH5A1P51649 535 aaPredicted RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 ARFIP2P53365 341 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 DNAJC7Q99615 494 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 ASCC2Q9H1I8 757 aaPredicted RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 DDX4Q9NQI0 724 aaKnown RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 ADAM21Q9UKJ8 722 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 RRP15Q9Y3B9 282 aaKnown RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 ANXA9O76027 345 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 HAUS5O94927 633 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 FNTAP49354 379 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 ARHGDIAP52565 204 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 ESRRGP62508 458 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 ARHGEF7Q14155 803 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 KIZQ2M2Z5 673 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 UBA3Q8TBC4 463 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 XAB2Q9HCS7 855 aaKnown RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 NEU2Q9Y3R4 380 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 CHUKO15111 745 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 IL1RL1Q01638 556 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 CYP24A1Q07973 514 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 MAP1SQ66K74 1059 aaPredicted RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 DDX53Q86TM3 631 aaKnown RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 ZNF410Q86VK4 478 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 LRRC1Q9BTT6 524 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 ASB7Q9H672 318 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 ITGA11Q9UKX5 1188 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 GYG2O15488 501 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 AP1G2O75843 785 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 PYGLP06737 847 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 LAMTOR4Q0VGL1 99 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 PDK2Q15119 407 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 RBM43Q6ZSC3 357 aaKnown RBP14.1□□□□□ -0.15
LDB3-202ENST00000361373 FAM47EQ6ZV65 393 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 HOMEZQ8IX15 550 aa14.1□□□□□ -0.15
LDB3-202ENST00000361373 NDUFS3O75489 264 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 TM4SF1P30408 202 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 SPRP35270 261 aaPredicted RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 HSPA9P38646 679 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 RARRES1P49788 294 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 SFSWAPQ12872 951 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 FAM117BQ6P1L5 589 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 LRRC37BQ96QE4 947 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 ROPN1BQ9BZX4 212 aaPredicted RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 ROPN1Q9HAT0 212 aaPredicted RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 METTL5Q9NRN9 209 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 POLBP06746 335 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 HMBSP08397 361 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 SDE2Q6IQ49 451 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 HIBCHQ6NVY1 386 aaPredicted RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 RIBC1Q8N443 379 aaPredicted RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 C1orf131Q8NDD1 294 aaKnown RBP14.09□□□□□ -0.15
LDB3-202ENST00000361373 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 CDCA5Q96FF9 252 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 CBWD1Q9BRT8 395 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
LDB3-202ENST00000361373 ABI2Q9NYB9 513 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms