RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 APOL6Q9BWW8 343 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 SIX4Q9UIU6 781 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 INTUQ9ULD6 942 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 C2CD2Q9Y426 696 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 NUB1Q9Y5A7 615 aa14.02□□□□□ -0.16
SQSTM1-201ENST00000360718 KIAA0100Q14667 2235 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 MEIS3P2A8K0S8 358 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 KCNK3O14649 394 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 RECQL4O94761 1208 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 KIF4AO95239 1232 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 KRT19P08727 400 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 KRT5P13647 590 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 MYL6P60660 151 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 FAM26DQ5JW98 314 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 SYCE1Q8N0S2 351 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 C1orf127Q8N9H9 656 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 ACTRT1Q8TDG2 376 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 BCAS4Q8TDM0 211 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 CALR3Q96L12 384 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 ERVK-5Q9HDB9 667 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 ACP6Q9NPH0 428 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 CHST12Q9NRB3 414 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 NAGPAQ9UK23 515 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 PADI3Q9ULW8 664 aa14.02□□□□□ -0.17
SQSTM1-201ENST00000360718 MGEA5O60502 916 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 CAND2O75155 1236 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 ASS1P00966 412 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 TNFAIP3P21580 790 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 CUL1Q13616 776 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 CUL2Q13617 745 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 ZNF699Q32M78 642 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 TTMPQ5BVD1 217 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 FAM126BQ8IXS8 530 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 HACE1Q8IYU2 909 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 ARL8AQ96BM9 186 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 SNX27Q96L92 541 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 KLK14Q9P0G3 267 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 TMEM59LQ9UK28 342 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 DERAQ9Y315 318 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 IPPQ9Y573 584 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 A0A0A6YYK5 440 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 CCDC188H7C350 402 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 H2AFZP0C0S5 128 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 GLRA4Q5JXX5 417 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 FBXO46Q6PJ61 603 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 ALKAL1Q6UXT8 129 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 H2AFVQ71UI9 128 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 CASKIN2Q8WXE0 1202 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 KIF12Q96FN5 646 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 CRISPLD2Q9H0B8 497 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 XYLT2Q9H1B5 865 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 ISCUQ9H1K1 167 aa14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 PACSIN2Q9UNF0 486 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-201ENST00000360718 A0A087WUV0 522 aaPredicted RBP14□□□□□ -0.17
SQSTM1-201ENST00000360718 GOLGA6L10A6NI86 522 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 CYP26A1O43174 497 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 CCT5P48643 541 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 BPIFB4P59827 614 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 EMC10Q5UCC4 262 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 KDM7AQ6ZMT4 941 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 B4GALNT4Q76KP1 1039 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 DIS3LQ8TF46 1054 aaKnown RBP14□□□□□ -0.17
SQSTM1-201ENST00000360718 U2AF1L4Q8WU68 220 aaKnown RBP14□□□□□ -0.17
SQSTM1-201ENST00000360718 TSPAN18Q96SJ8 248 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 PLEKHA4Q9H4M7 779 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 SEPT11Q9NVA2 429 aaKnown RBP14□□□□□ -0.17
SQSTM1-201ENST00000360718 PARP2Q9UGN5 583 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 ITGA11Q9UKX5 1188 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 NENFQ9UMX5 172 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 SCN1AP35498 2009 aa14□□□□□ -0.17
SQSTM1-201ENST00000360718 TDRD15B5MCY1 1934 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 HMGB1P1B2RPK0 211 aaPredicted RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 PGRMC1O00264 195 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 RAD51CO43502 376 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 XPOTO43592 962 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 CEP104O60308 925 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 CALCAP01258 141 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 CD4P01730 458 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 ITGB3P05106 788 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 FAM153BP0C7A2 387 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 HSPA1AP0DMV8 641 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 HSPA1BP0DMV9 641 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 ATICP31939 592 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 PDE6CP51160 858 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 ATN1P54259 1190 aaPredicted RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 FAM153CQ494X1 144 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 SPATS2Q86XZ4 545 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 KLHL7Q8IXQ5 586 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 LRRC45Q96CN5 670 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 AGPAT1Q99943 283 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 SYT11Q9BT88 431 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 NIF3L1Q9GZT8 377 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 DPP3Q9NY33 737 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 FAM153AQ9UHL3 310 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 ESYT3A0FGR9 886 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 TMCO5BA8MYB1 307 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 SGPL1O95470 568 aa13.99□□□□□ -0.17
SQSTM1-201ENST00000360718 P4HA1P13674 534 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms