RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 BRD2P25440 801 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 NSFP46459 744 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 HADHBP55084 474 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 FAM189BP81408 668 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 AMPD2Q01433 879 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 NAA35Q5VZE5 725 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SLC24A5Q71RS6 500 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TPCN2Q8NHX9 752 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TOX2Q96NM4 488 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MIOSQ9NXC5 875 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CDC23Q9UJX2 597 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 INPPL1O15357 1258 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CYP1A2P05177 515 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CFHP08603 1231 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MYBL1P10243 752 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 RTN4RL1Q86UN2 441 aaPredicted RBP22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ANKLE1Q8NAG6 615 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 RNF169Q8NCN4 708 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TFAP2BQ92481 460 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TWNKQ96RR1 684 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ZSWIM1Q9BR11 485 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ZNF518BQ9C0D4 1074 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TSPYL2Q9H2G4 693 aaPredicted RBP22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 HMGXB4Q9UGU5 601 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 KIAA1257Q9ULG3 409 aa22.33■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DCDC2CA8MYV0 355 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ENC1O14682 589 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 NBNO60934 754 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 COL6A1P12109 1028 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CD19P15391 556 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SCNN1GP51170 649 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 NDST1P52848 882 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ATN1P54259 1190 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 LILRA4P59901 499 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 LIMS2Q7Z4I7 341 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PHF13Q86YI8 300 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MCOLN2Q8IZK6 566 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 LRRC57Q8N9N7 239 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 LINC01599Q8WXQ3 324 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CPA5Q8WXQ8 436 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ZNF653Q96CK0 615 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 VCPIP1Q96JH7 1222 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 NT5C1AQ9BXI3 368 aa22.32■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SPTLC1O15269 473 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MTA2O94776 668 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 FAM163BP0C2L3 166 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 VDRP11473 427 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 RPL9P32969 192 aaKnown RBP22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CDH5P33151 784 aaPredicted RBP22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 AFF1P51825 1210 aaKnown RBP22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 GRIK3Q13003 919 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 GPNMBQ14956 572 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SOWAHAQ2M3V2 549 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PLEKHG4Q58EX7 1191 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 UNC93AQ86WB7 457 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PASD1Q8IV76 773 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SYCE1Q8N0S2 351 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TMEM35BQ8NCS4 154 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MRPL45Q9BRJ2 306 aaKnown RBP22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 OSGEPQ9NPF4 335 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 AVENQ9NQS1 362 aaPredicted RBP22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 UVRAGQ9P2Y5 699 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CEP83Q9Y592 693 aa22.31■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PARNO95453 639 aaKnown RBP22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MON1BQ7L1V2 547 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DPH6Q7L8W6 267 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SLFN11Q7Z7L1 901 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TOP6BLQ8N6T0 577 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MNS1Q8NEH6 495 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 APBB2Q92870 758 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 LHX5Q9H2C1 402 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CTTNBP2NLQ9P2B4 639 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SAR1BQ9Y6B6 198 aa22.3■■□□□ 1.16
MAP1LC3A-201ENST00000360668 EFCAB8A8MWE9 144 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PRLRP16471 622 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 C1QBPQ07021 282 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 FAAP100Q0VG06 881 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 WHAMMP3Q1A5X7 153 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CEP112Q8N8E3 955 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 APPL2Q8NEU8 664 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SEPT8Q92599 483 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TANC1Q9C0D5 1861 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CNOT8Q9UFF9 292 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 COG5Q9UP83 839 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 FAM170AA1A519 330 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PODXLO00592 558 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 HUS1O60921 280 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SSTR3P32745 418 aaPredicted RBP22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TLE2Q04725 743 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ORC1Q13415 861 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 STILQ15468 1287 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CNGA2Q16280 664 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TRIM60Q495X7 471 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SGO2Q562F6 1265 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MEI1Q5TIA1 1274 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 LIN9Q5TKA1 542 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ANKRD7Q92527 254 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DDX27Q96GQ7 796 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 HEXIM2Q96MH2 286 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DNAI2Q9GZS0 605 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms