RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CCZ1P86791 482 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-203ENST00000359759 GALNTL6Q49A17 601 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 SH3BP5LQ7L8J4 393 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 SLC44A2Q8IWA5 706 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-203ENST00000359759 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 ZNF560Q96MR9 790 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 ARHGEF3Q9NR81 526 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 MPP6Q9NZW5 540 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 PSMD3O43242 534 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 THUMPD3Q9BV44 507 aaKnown RBP16.73■□□□□ 0.27
COL18A1-203ENST00000359759 C10orf88Q9H8K7 445 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-203ENST00000359759 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 CYBBP04839 570 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 PYGMP11217 842 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 SLC7A14Q8TBB6 771 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 TNIP3Q96KP6 325 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 MAP3K20Q9NYL2 800 aaKnown RBP16.73■□□□□ 0.27
COL18A1-203ENST00000359759 RHOBTB1O94844 696 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 SKIV2LQ15477 1246 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 TNIP2Q8NFZ5 429 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 SPATA18Q8TC71 538 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 KCNB2Q92953 911 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 COQ7Q99807 217 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 TRIM62Q9BVG3 475 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 PIF1Q9H611 641 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 METTL5Q9NRN9 209 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 RPS7P62081 194 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 TP53BP2Q13625 1128 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 AASDHQ4L235 1098 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 PRUNE1Q86TP1 453 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 JADE3Q92613 823 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 MKL2Q9ULH7 1088 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 FHOD1Q9Y613 1164 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 COMTP21964 271 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 ATP2C1P98194 919 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 ZNF23P17027 643 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 SPRP35270 261 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 SOX6P35712 828 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 NMD3Q96D46 503 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 SEPT5Q99719 369 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 STK33Q9BYT3 514 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 OSBPL8Q9BZF1 889 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 DOLKQ9UPQ8 538 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 SNRPAP09012 282 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 CDC16Q13042 620 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 EPC2Q52LR7 807 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 SGSM3Q96HU1 749 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 FAM129AQ9BZQ8 928 aa16.72■□□□□ 0.27
COL18A1-203ENST00000359759 PAPOLBQ9NRJ5 636 aaKnown RBP16.72■□□□□ 0.27
COL18A1-203ENST00000359759 POLBP06746 335 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 COPAP53621 1224 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 ARHGEF7Q14155 803 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 PGBD3Q8N328 593 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 LRRC71Q8N4P6 559 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 RBBP8NLQ8NC74 664 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-203ENST00000359759 DEPDC7Q96QD5 511 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 DCP1AQ9NPI6 582 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-203ENST00000359759 GJB7Q6PEY0 223 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 PLEKHG1Q9ULL1 1385 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 EVPLLA8MZ36 301 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 POU4F1Q01851 419 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 PTGISQ16647 500 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 PGS1Q32NB8 556 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 FAXCQ5TGI0 409 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 KIRREL3Q8IZU9 778 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 UXS1Q8NBZ7 420 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 MAGEA13PA6NCF6 341 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 KLHL18O94889 574 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 DMPKQ09013 629 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 ZCWPW2Q504Y3 356 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 PI4K2AQ9BTU6 479 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 VIPAS39Q9H9C1 493 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 MAGI2Q86UL8 1455 aa16.71■□□□□ 0.27
COL18A1-203ENST00000359759 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.26
COL18A1-203ENST00000359759 FAM205CA6NFA0 338 aa16.71■□□□□ 0.26
COL18A1-203ENST00000359759 PSMA4P25789 261 aaKnown RBP16.71■□□□□ 0.26
COL18A1-203ENST00000359759 CHI3L1P36222 383 aaPredicted RBP16.71■□□□□ 0.26
COL18A1-203ENST00000359759 SPP2Q13103 211 aa16.71■□□□□ 0.26
COL18A1-203ENST00000359759 LRRC34Q8IZ02 419 aa16.71■□□□□ 0.26
COL18A1-203ENST00000359759 CENPLQ8N0S6 344 aaPredicted RBP16.71■□□□□ 0.26
COL18A1-203ENST00000359759 FAM111AQ96PZ2 611 aa16.71■□□□□ 0.26
COL18A1-203ENST00000359759 ERBB3P21860 1342 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 MRPS35P82673 323 aaKnown RBP16.7■□□□□ 0.26
COL18A1-203ENST00000359759 NCOA4Q13772 614 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 PIGHQ14442 188 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-203ENST00000359759 SLC29A2Q14542 456 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 OTUD5Q96G74 571 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 FAM153AQ9UHL3 310 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 F8W810 466 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 EYA4O95677 639 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 HSMCR30P0CW71 290 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 FMO5P49326 533 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL18A1-203ENST00000359759 VMP1Q96GC9 406 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 REEP2Q9BRK0 252 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms