RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 LINC00523Q86TU6 105 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 HERC6Q8IVU3 1022 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CEP70Q8NHQ1 597 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 RFFLQ8WZ73 363 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 OLFM3Q96PB7 478 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 IL25Q9H293 177 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 FBXL5Q9UKA1 691 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 BLOC1S6Q9UL45 172 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CDYLQ9Y232 598 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 TOMM70O94826 608 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MYL2P10916 166 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 GRK3P35626 688 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ARSEP51690 589 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 DHX34Q14147 1143 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PTPAQ15257 358 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ZRANB3Q5FWF4 1079 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 C6orf10Q5SRN2 563 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ITIH5Q86UX2 942 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SEPT1Q8WYJ6 367 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 C18orf8Q96DM3 657 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ATXN7L3BQ96GX2 97 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 WDR24Q96S15 920 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 OXCT2Q9BYC2 517 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ADNPQ9H2P0 1102 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PPCSQ9HAB8 311 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PRMT7Q9NVM4 692 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 NOP53Q9NZM5 478 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 UVRAGQ9P2Y5 699 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PCDHB12Q9Y5F1 795 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SPATA31D1Q6ZQQ2 1576 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TRIM16O95361 564 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TBX2Q13207 712 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CCDC60Q8IWA6 550 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 UTP6Q9NYH9 597 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF70Q9UC06 446 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 DSEQ9UL01 958 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 AURKCQ9UQB9 309 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CAB39Q9Y376 341 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PDXKO00764 312 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 GPR182O15218 404 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 NMT2O60551 498 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PYGMP11217 842 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 GUCY1A2P33402 732 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 THPOP40225 353 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SNRPFP62306 86 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PLCL1Q15111 1095 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 GOLGA7BQ2TAP0 167 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 C16orf89Q6UX73 402 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 C11orf96Q7Z7L8 435 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PCSK9Q8NBP7 692 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ARRDC4Q8NCT1 418 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SLC20A1Q8WUM9 679 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 OSCP1Q8WVF1 389 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 JADE3Q92613 823 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MRPS31Q92665 395 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SMARCAL1Q9NZC9 954 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PKD2L2Q9NZM6 624 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 NAGPAQ9UK23 515 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MAFGO15525 162 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 RTN2O75298 545 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 NPTXRO95502 500 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 S100A5P33763 92 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TAF6P49848 677 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ATXN3P54252 364 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 DDR1Q08345 913 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 R3HDM1Q15032 1099 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 STYK1Q6J9G0 422 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF544Q6NX49 715 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 FAM180AQ6UWF9 173 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 USP33Q8TEY7 942 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MFSD1Q9H3U5 465 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SALL1Q9NSC2 1324 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 F5H5T6 163 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 FSBPO95073 299 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 FTLP02792 175 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ETFBP38117 255 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PRKCEQ02156 737 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF177Q13360 481 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 DYNC1I2Q13409 638 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TTLL9Q3SXZ7 439 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CACHD1Q5VU97 1274 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ABHD10Q9NUJ1 306 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 WWOXQ9NZC7 414 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TSPOAP1O95153 1857 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SMAPO00193 183 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 FKBP9O95302 570 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TRIM49P0CI25 452 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TRIM49CP0CI26 452 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MRPS15P82914 257 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CAMK2GQ13555 558 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 FKBP9P1Q75LS8 142 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CLYBLQ8N0X4 340 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 NUP93Q8N1F7 819 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MMGT1Q8N4V1 131 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MRPL48Q96GC5 212 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 YME1L1Q96TA2 773 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 NT5C1AQ9BXI3 368 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 MRPL1Q9BYD6 325 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CAPN10Q9HC96 672 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms