RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CYP1A1P04798 512 aaPredicted RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 CYP11B1P15538 503 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 PTGIRP43119 386 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 NFIL3Q16649 462 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 RSBN1LQ6PCB5 846 aaPredicted RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 DSTYKQ6XUX3 929 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 FAM160B2Q86V87 743 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 TRIM50Q86XT4 487 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 PASD1Q8IV76 773 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 SLC9A9Q8IVB4 645 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 CPA5Q8WXQ8 436 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 SEC14L1Q92503 715 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 AGO4Q9HCK5 861 aaKnown RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 SLCO1B3Q9NPD5 702 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 FEM1BQ9UK73 627 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 MTUS1Q9ULD2 1270 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 TTC7AQ9ULT0 858 aaPredicted RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 ZNF536O15090 1300 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 ASTN2O75129 1339 aaPredicted RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 RPTORQ8N122 1335 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 HNRNPDLO14979 420 aaKnown RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 CHRNA3P32297 505 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 MFAP3P55082 362 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 SFSWAPQ12872 951 aaKnown RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 DHX34Q14147 1143 aaKnown RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 B3GNT9Q6UX72 402 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 RNF207Q6ZRF8 634 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 SLC13A5Q86YT5 568 aaPredicted RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 PDCD7Q8N8D1 485 aaKnown RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 PRPF31Q8WWY3 499 aaKnown RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 JDP2Q8WYK2 163 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 RMDN3Q96TC7 470 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 CENPKQ9BS16 269 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 STRA6Q9BX79 667 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 BRD8Q9H0E9 1235 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 NOCTQ9UK39 431 aaKnown RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 ZNF510Q9Y2H8 683 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 LSM1O15116 133 aaKnown RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 PGM3O95394 542 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CCNE2O96020 404 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 ICAM1P05362 532 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 ALOX15P16050 662 aaPredicted RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 COILP38432 576 aaPredicted RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 NPTX2P47972 431 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 GJA8P48165 433 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CALCOCO2Q13137 446 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 GALNTL6Q49A17 601 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 SLC44A4Q53GD3 710 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 SGO2Q562F6 1265 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 LRRC74BQ6ZQY2 392 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 NANOGNBQ7Z5D8 188 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 PRUNE1Q86TP1 453 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 SYTL5Q8TDW5 730 aaPredicted RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 CEP170P1Q96L14 293 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 NT5C1BQ96P26 610 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 FAM213AQ9BRX8 229 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 KMT5AQ9NQR1 393 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 FZD1Q9UP38 647 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 USTQ9Y2C2 406 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 DIS3Q9Y2L1 958 aaKnown RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 GSTA2P09210 222 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 HARSP12081 509 aaKnown RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 CCR3P51677 355 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CDR2Q01850 454 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 KRT39Q6A163 491 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 IZUMO2Q6UXV1 221 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 EXOC3L1Q86VI1 746 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 FAM71AQ8IYT1 594 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 SMC1BQ8NDV3 1235 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 BSNDQ8WZ55 320 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 SPATA16Q9BXB7 569 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 PDGFDQ9GZP0 370 aaPredicted RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 UBAP1Q9NZ09 502 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CNTNAP1P78357 1384 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 DNAJC6O75061 913 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 MAPK4P31152 587 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 KRT17Q04695 432 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 ZBTB16Q05516 673 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 DMP1Q13316 513 aaPredicted RBP9.88□□□□□ -0.83
SMG6-202ENST00000354901 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 ARHGEF16Q5VV41 709 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 SPOPLQ6IQ16 392 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 C11orf63Q6NUN7 778 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 ASRGL1Q7L266 308 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CYFIP1Q7L576 1253 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 WDR60Q8WVS4 1066 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CLEC4DQ8WXI8 215 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CENPTQ96BT3 561 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 IWS1Q96ST2 819 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CHST7Q9NS84 486 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 TBX20Q9UMR3 447 aa9.88□□□□□ -0.83
SMG6-202ENST00000354901 CFAP69A5D8W1 941 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 O00370 1275 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 USP1O94782 785 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 GJB6O95452 261 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 LYNP07948 512 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 ASNSP08243 561 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PPP2R5EQ16537 467 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms