RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ALDH16A1Q8IZ83 802 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SLC7A5P1Q8MH63 180 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 TCP10LQ8TDR4 215 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SLCO2A1Q92959 643 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 VPS50Q96JG6 964 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 COX4I2Q96KJ9 171 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 MTMR9Q96QG7 549 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
IFT88-202ENST00000351808 PLA2G12BQ9BX93 195 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 WNT8AQ9H1J5 351 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SAYSD1Q9NPB0 183 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 TMOD2Q9NZR1 351 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SLC17A7Q9P2U7 560 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 COQ6Q9Y2Z9 468 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SMCO2A6NFE2 343 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 TSPY2A6NKD2 308 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SPECC1L-ADORA2AF8WAN1 911 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SLC37A4O43826 429 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 FGFR2P21802 821 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 FDFT1P37268 417 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 ARHGAP44Q17R89 818 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 PCNX4Q63HM2 1172 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 GJA10Q969M2 543 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 CFAP57Q96MR6 1250 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 FAM118BQ9BPY3 351 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 RRN3Q9NYV6 651 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SENP1Q9P0U3 644 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 PPARGC1AQ9UBK2 798 aaKnown RBP13.93□□□□□ -0.18
IFT88-202ENST00000351808 MEI4A8MW99 385 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 E9PMD0 336 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 PIAS1O75925 651 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SORBS2O94875 1100 aaKnown RBP13.93□□□□□ -0.18
IFT88-202ENST00000351808 FGRP09769 529 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 HOXA7P31268 230 aaPredicted RBP13.93□□□□□ -0.18
IFT88-202ENST00000351808 XIAPP98170 497 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 TMEM119Q4V9L6 283 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 IZUMO3Q5VZ72 239 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 POTEHQ6S545 545 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 MARVELD2Q8N4S9 558 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
IFT88-202ENST00000351808 CD101Q93033 1021 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 SLC35C1Q96A29 364 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 CCT7Q99832 543 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 UBA5Q9GZZ9 404 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 TRPC7Q9HCX4 862 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 CASZ1Q86V15 1759 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 ADAMTS7Q9UKP4 1686 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 CAPN14A8MX76 684 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 KRT38O76015 456 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 SLC5A1P13866 664 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 ACADVLP49748 655 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
IFT88-202ENST00000351808 MECOMQ03112 1051 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 SNAPC2Q13487 334 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 ZNF746Q6NUN9 644 aaPredicted RBP13.92□□□□□ -0.18
IFT88-202ENST00000351808 ELMSAN1Q6PJG2 1045 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 ERI1Q8IV48 349 aaKnown RBP13.92□□□□□ -0.18
IFT88-202ENST00000351808 PNMA1Q8ND90 353 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 SLC20A1Q8WUM9 679 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 CNBD2Q96M20 576 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 BTBD9Q96Q07 612 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 UIMC1Q96RL1 719 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 VPS37BQ9H9H4 285 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 MYPNQ86TC9 1320 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 A0A088AWK7 358 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 EIF3FO00303 357 aaPredicted RBP13.92□□□□□ -0.18
IFT88-202ENST00000351808 TDP2O95551 362 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 ABHD2P08910 425 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 SERPINB6P35237 376 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
IFT88-202ENST00000351808 MYBPC1Q00872 1141 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 FASTKD3Q14CZ7 662 aaKnown RBP13.92□□□□□ -0.18
IFT88-202ENST00000351808 DLGAP5Q15398 846 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 DNAL1Q4LDG9 190 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 EFHC1Q5JVL4 640 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 SCAIQ8N9R8 606 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 SLC5A5Q92911 643 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 CLIP3Q96DZ5 547 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 ZNHIT2Q9UHR6 403 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 INPP5FQ9Y2H2 1132 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
IFT88-202ENST00000351808 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
IFT88-202ENST00000351808 DNAJA2O60884 412 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 LRRN2O75325 713 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 C6orf222P0C671 652 aaPredicted RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 GOLGA8HP0CJ92 632 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 HADHBP55084 474 aaKnown RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 SPIDRQ14159 915 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 RABGAP1LQ5R372 815 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 TDRPQ86YL5 185 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 ERLEC1Q96DZ1 483 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 NEURL2Q9BR09 285 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 CRNKL1Q9BZJ0 848 aaKnown RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 SPO11Q9Y5K1 396 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms