RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CFHP08603 1231 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 VDRP11473 427 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 NDST1P52848 882 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 FAM43BQ6ZT52 329 aaPredicted RBP19.86■□□□□ 0.77
PTN-201ENST00000348225 MON1BQ7L1V2 547 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 PEX26Q7Z412 305 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 CTU1Q7Z7A3 348 aaKnown RBP19.86■□□□□ 0.77
PTN-201ENST00000348225 FTHL17Q9BXU8 183 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 GOLGA2P5Q9HBQ8 144 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 RGS18Q9NS28 235 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 ADAM22Q9P0K1 906 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 COG5Q9UP83 839 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 MEIS3P2A8K0S8 358 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 NCK2O43639 380 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 BUB1BO60566 1050 aaPredicted RBP19.85■□□□□ 0.77
PTN-201ENST00000348225 CDH5P33151 784 aaPredicted RBP19.85■□□□□ 0.77
PTN-201ENST00000348225 C1QBPQ07021 282 aaKnown RBP19.85■□□□□ 0.77
PTN-201ENST00000348225 MBTPS1Q14703 1052 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 RPS6KA1Q15418 735 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 C11orf63Q6NUN7 778 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 UNC93AQ86WB7 457 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 RNF169Q8NCN4 708 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 ZNF564Q8TBZ8 553 aaPredicted RBP19.85■□□□□ 0.77
PTN-201ENST00000348225 UBE2Q2Q8WVN8 375 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 TFAP2BQ92481 460 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 TWNKQ96RR1 684 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 OSBPL9Q96SU4 736 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 NUP85Q9BW27 656 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 HMGXB4Q9UGU5 601 aa19.85■□□□□ 0.77
PTN-201ENST00000348225 PITPNM1O00562 1244 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 ATMINO43313 823 aaPredicted RBP19.84■□□□□ 0.77
PTN-201ENST00000348225 SSTR3P32745 418 aaPredicted RBP19.84■□□□□ 0.77
PTN-201ENST00000348225 STILQ15468 1287 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 SGO2Q562F6 1265 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 ECHDC2Q86YB7 292 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 GSTCDQ8NEC7 633 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 HEXIM2Q96MH2 286 aaKnown RBP19.84■□□□□ 0.77
PTN-201ENST00000348225 ZSWIM1Q9BR11 485 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 C11orf70Q9BRQ4 267 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 LHX5Q9H2C1 402 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 TSPYL2Q9H2G4 693 aaPredicted RBP19.84■□□□□ 0.77
PTN-201ENST00000348225 AMFRQ9UKV5 643 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 EFCAB8A8MWE9 144 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 DYNC1I1O14576 645 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 SRGAP2O75044 1071 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 CALB1P05937 261 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 SCNN1GP51170 649 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 FBXO46Q6PJ61 603 aaPredicted RBP19.84■□□□□ 0.77
PTN-201ENST00000348225 APPL2Q8NEU8 664 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 MRPL45Q9BRJ2 306 aaKnown RBP19.84■□□□□ 0.77
PTN-201ENST00000348225 CRISPLD2Q9H0B8 497 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 MRPL47Q9HD33 250 aaKnown RBP19.84■□□□□ 0.77
PTN-201ENST00000348225 SCINQ9Y6U3 715 aa19.84■□□□□ 0.77
PTN-201ENST00000348225 CTAGE15A4D2H0 777 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 PQBP1O60828 265 aaKnown RBP19.83■□□□□ 0.76
PTN-201ENST00000348225 HUS1O60921 280 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 KIF4AO95239 1232 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 TFRCP02786 760 aaKnown RBP19.83■□□□□ 0.76
PTN-201ENST00000348225 CTAGE8P0CG41 777 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 MMP8P22894 467 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 RRM1P23921 792 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 RPL9P32969 192 aaKnown RBP19.83■□□□□ 0.76
PTN-201ENST00000348225 LILRA4P59901 499 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 TUBB4BP68371 445 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 GRIK3Q13003 919 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 ORC1Q13415 861 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 CNGA2Q16280 664 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 SOWAHAQ2M3V2 549 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 MMS22LQ6ZRQ5 1243 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 SLC24A5Q71RS6 500 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 DPH6Q7L8W6 267 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 CTAGE6Q86UF2 777 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 NT5DC3Q86UY8 548 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 CTAGE4Q8IX94 777 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 TOP6BLQ8N6T0 577 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 MSANTD4Q8NCY6 345 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 C1orf131Q8NDD1 294 aaKnown RBP19.83■□□□□ 0.76
PTN-201ENST00000348225 ABCB6Q9NP58 842 aa19.83■□□□□ 0.76
PTN-201ENST00000348225 PODXLO00592 558 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 CES2O00748 559 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 SPTLC1O15269 473 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 TADA3O75528 432 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 EOMESO95936 686 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 FAM163BP0C2L3 166 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 IBSPP21815 317 aaPredicted RBP19.82■□□□□ 0.76
PTN-201ENST00000348225 ZNF598Q86UK7 904 aaKnown RBP19.82■□□□□ 0.76
PTN-201ENST00000348225 OR6B3Q8NGW1 331 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 GOLGA1Q92805 767 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 ZNF333Q96JL9 665 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 RPGRIP1Q96KN7 1286 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 CAPZA3Q96KX2 299 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 SNX25Q9H3E2 840 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 GOLPH3Q9H4A6 298 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 MIOSQ9NXC5 875 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 RNF14Q9UBS8 474 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.82■□□□□ 0.76
PTN-201ENST00000348225 STXBP5LQ9Y2K9 1186 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 BRCA2P51587 3418 aa19.82■□□□□ 0.76
PTN-201ENST00000348225 A8MXQ7 604 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 C9IYK1 514 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms