RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 PARD3BQ8TEW8 1205 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 PRPF31Q8WWY3 499 aaKnown RBP9.09□□□□□ -0.95
FGD6-201ENST00000343958 SIK3Q9Y2K2 1263 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 IGSF9BQ9UPX0 1349 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 SLIT1O75093 1534 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 CHI3L2Q15782 390 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 CLEC16AQ2KHT3 1053 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 DDIASQ8IXT1 998 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 NCLNQ969V3 563 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 C10orf88Q9H8K7 445 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 PXMP2Q9NR77 195 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 NDE1Q9NXR1 346 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 PHTF1Q9UMS5 762 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 ARHGEF37A1IGU5 675 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 ZBBXA8MT70 800 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 DGKIO75912 1065 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 GRIK1P39086 918 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 ZNF677Q86XU0 584 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 PPIL6Q8IXY8 311 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 EMC1Q8N766 993 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 TNIP3Q96KP6 325 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 CDC42EP4Q9H3Q1 356 aaKnown RBP9.09□□□□□ -0.95
FGD6-201ENST00000343958 L3MBTL1Q9Y468 752 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 CCDC22O60826 627 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 APOEP02649 317 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 PGK2P07205 417 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 SNRPFP62306 86 aaKnown RBP9.09□□□□□ -0.95
FGD6-201ENST00000343958 AP2B1P63010 937 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 UPF3AQ9H1J1 476 aaKnown RBP9.09□□□□□ -0.95
FGD6-201ENST00000343958 CARD9Q9H257 536 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 NWD1Q149M9 1564 aa9.09□□□□□ -0.95
FGD6-201ENST00000343958 CYP24A1Q07973 514 aa9.09□□□□□ -0.96
FGD6-201ENST00000343958 BIRC2Q13490 618 aa9.09□□□□□ -0.96
FGD6-201ENST00000343958 NBPF12Q5TAG4 269 aaPredicted RBP9.09□□□□□ -0.96
FGD6-201ENST00000343958 ARMC2Q8NEN0 867 aa9.09□□□□□ -0.96
FGD6-201ENST00000343958 GMCL1Q96IK5 515 aa9.09□□□□□ -0.96
FGD6-201ENST00000343958 CGRRF1Q99675 332 aa9.09□□□□□ -0.96
FGD6-201ENST00000343958 FAM96AQ9H5X1 160 aa9.09□□□□□ -0.96
FGD6-201ENST00000343958 ZFATQ9P243 1243 aa9.09□□□□□ -0.96
FGD6-201ENST00000343958 B2RBV5 119 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 PDE2AO00408 941 aaPredicted RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 PFDN1O60925 122 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 CSDE1O75534 798 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 SLC15A2Q16348 729 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 PCSK7Q16549 785 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 MIIPQ5JXC2 388 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 LRRC8EQ6NSJ5 796 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 DENND5BQ6ZUT9 1274 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 FRA10AC1Q70Z53 315 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 CXorf38Q8TB03 319 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 PABPC3Q9H361 631 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 MANSC1Q9H8J5 431 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TRAF3IP3Q9Y228 551 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 RNF225M0QZC1 329 aaPredicted RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 PPP1R12AO14974 1030 aaPredicted RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 DLG4P78352 724 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 PRAMEP78395 509 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 CHST13Q8NET6 341 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 AKT1S1Q96B36 256 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 SGSM3Q96HU1 749 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 FAM8A1Q9UBU6 413 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 RAB21Q9UL25 225 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 RIC1Q4ADV7 1423 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 FNTAP49354 379 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 CASP5P51878 434 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 MYBL2P10244 700 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TARSP26639 723 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 MYL6P60660 151 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 SPATA2LQ8IUW3 424 aaPredicted RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 PPHLN1Q8NEY8 458 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 SLC7A14Q8TBB6 771 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 SPATA18Q8TC71 538 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 SLC35C1Q96A29 364 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 FAM111AQ96PZ2 611 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 NT5C1AQ9BXI3 368 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TLR10Q9BXR5 811 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.08□□□□□ -0.96
FGD6-201ENST00000343958 PAK5Q9P286 719 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 GEMIN4P57678 1058 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 PHEXP78562 749 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 KCNMA1Q12791 1236 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TMED1Q13445 227 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TAS2R14Q9NYV8 317 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TRIM49D1C9J1S8 452 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 OTUD4Q01804 1114 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 PPATQ06203 517 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 KCNV1Q6PIU1 500 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 FASTKD5Q7L8L6 764 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 SPATA31A6Q5VVP1 1343 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 HIC1Q14526 733 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 AGGF1Q8N302 714 aaeCLIP9.08□□□□□ -0.96
FGD6-201ENST00000343958 LNX1Q8TBB1 728 aaPredicted RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 KAT5Q92993 513 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 HAUS8Q9BT25 410 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TRIM15Q9C019 465 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 TASP1Q9H6P5 420 aa9.08□□□□□ -0.96
FGD6-201ENST00000343958 CACYBPQ9HB71 228 aaKnown RBP9.08□□□□□ -0.96
FGD6-201ENST00000343958 LOC100653049A0A140TA62 436 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms