RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 ZNF536O15090 1300 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 PRRC2BQ5JSZ5 2229 aaKnown RBP13.23□□□□□ -0.29
LMX1A-202ENST00000342310 B4GALT5O43286 388 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 SNX3O60493 162 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 PROSCO94903 275 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MT-ND3P03897 115 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 CD48P09326 243 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 SFNP31947 248 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 PHKA2P46019 1235 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 TAF11Q15544 211 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 HIF1AQ16665 826 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 CENPUQ71F23 418 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MAP4K3Q8IVH8 894 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 TRIM6Q9C030 488 aaPredicted RBP13.22□□□□□ -0.29
LMX1A-202ENST00000342310 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 CISHQ9NSE2 258 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 TNNC2P02585 160 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 F7P08709 466 aaPredicted RBP13.22□□□□□ -0.29
LMX1A-202ENST00000342310 ADRA1DP25100 572 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 RFC1P35251 1148 aaPredicted RBP13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MMP13P45452 471 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 FNTAP49354 379 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 CTCFP49711 727 aaPredicted RBP13.22□□□□□ -0.29
LMX1A-202ENST00000342310 POU5F1Q01860 360 aaKnown RBP13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MAMLD1Q13495 774 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 ALCAMQ13740 583 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 BMPR2Q13873 1038 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 FYB2Q5VWT5 728 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 RTKN2Q8IZC4 609 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 FITM2Q8N6M3 262 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMX1A-202ENST00000342310 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 PARVAQ9NVD7 372 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMX1A-202ENST00000342310 ARMCX1Q9P291 453 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 PHTF1Q9UMS5 762 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 PAPPAQ13219 1627 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 FAM47DPA6NHR8 397 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 ATP6V1G2O95670 118 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 CXCL8P10145 99 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 RBP3P10745 1247 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 SPARCL1Q14515 664 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MAPK6Q16659 721 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MOB2Q70IA6 237 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 ANKS1BQ7Z6G8 1248 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 MAIP1Q8WWC4 291 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 CCT6BQ92526 530 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 EPB41L4BQ9H329 900 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 GGA3Q9NZ52 723 aa13.22□□□□□ -0.29
LMX1A-202ENST00000342310 TRMT10CQ7L0Y3 403 aaKnown RBP13.21□□□□□ -0.29
LMX1A-202ENST00000342310 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 APBB1IPQ7Z5R6 666 aaPredicted RBP13.21□□□□□ -0.29
LMX1A-202ENST00000342310 FAF2Q96CS3 445 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 PGM2Q96G03 612 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 FAM111AQ96PZ2 611 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 TRIM56Q9BRZ2 755 aaKnown RBP13.21□□□□□ -0.29
LMX1A-202ENST00000342310 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 ARL2BPQ9Y2Y0 163 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 UBIAD1Q9Y5Z9 338 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.29
LMX1A-202ENST00000342310 CES2O00748 559 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 RFX1P22670 979 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 ANXA13P27216 316 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 SLC8A1P32418 973 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 TCF7P36402 384 aaPredicted RBP13.21□□□□□ -0.29
LMX1A-202ENST00000342310 KDSRQ06136 332 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 XKR3Q5GH77 459 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 IL31Q6EBC2 164 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 LONP2Q86WA8 852 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 ZBTB8OSQ8IWT0 167 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 PDIK1LQ8N165 341 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 SPATA18Q8TC71 538 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 ART4Q93070 314 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 ACAD9Q9H845 621 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 RAB6BQ9NRW1 208 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 NRBP2Q9NSY0 501 aa13.21□□□□□ -0.29
LMX1A-202ENST00000342310 EXTL3O43909 919 aa13.21□□□□□ -0.3
LMX1A-202ENST00000342310 PDGFRBP09619 1106 aa13.21□□□□□ -0.3
LMX1A-202ENST00000342310 SP2Q02086 613 aa13.21□□□□□ -0.3
LMX1A-202ENST00000342310 CLUL1Q15846 466 aa13.21□□□□□ -0.3
LMX1A-202ENST00000342310 SGSM1Q2NKQ1 1148 aa13.21□□□□□ -0.3
LMX1A-202ENST00000342310 MTDHQ86UE4 582 aaKnown RBP13.21□□□□□ -0.3
LMX1A-202ENST00000342310 CPB2Q96IY4 423 aa13.21□□□□□ -0.3
LMX1A-202ENST00000342310 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.3
LMX1A-202ENST00000342310 GLRA2P23416 452 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 ATXN3P54252 364 aaPredicted RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 RAD23BP54727 409 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 HADHQ16836 314 aaKnown RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 ABRAQ8N0Z2 381 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 FBXO36Q8NEA4 188 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 JOSD2Q8TAC2 188 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms