RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 SRGAP2CP0DJJ0 459 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 PDIA2Q13087 525 aaKnown RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 NAB2Q15742 525 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 THNSL1Q8IYQ7 743 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 PPM1NQ8N819 430 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 DEPTORQ8TB45 409 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 SENP7Q9BQF6 1050 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMEM117Q9H0C3 514 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 INTS2Q9H0H0 1204 aaKnown RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 CNOT10Q9H9A5 744 aaKnown RBP11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 ABCF3Q9NUQ8 709 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 SEL1LQ9UBV2 794 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZFP69BQ9UJL9 534 aa11.04□□□□□ -0.64
CAPRIN1-201ENST00000341394 GJB6O95452 261 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ADCY2Q08462 1091 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 SPATA21Q7Z572 469 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 MCPH1Q8NEM0 835 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 RUNDC3BQ96NL0 473 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 MRPL42Q9Y6G3 142 aaKnown RBP11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMEM88BA6NKF7 163 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ARIH2O95376 493 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMPRSS15P98073 1019 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 BRDTQ58F21 947 aaPredicted RBP11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 CEP128Q6ZU80 1094 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 CYP26B1Q9NR63 512 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 NFASCO94856 1347 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 DGAT1O75907 488 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 KRT10P13645 584 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 GPC5P78333 572 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ORC1Q13415 861 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 IZUMO3Q5VZ72 239 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ANO5Q75V66 913 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 NME8Q8N427 588 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ADAM22Q9P0K1 906 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 EXOC7Q9UPT5 735 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 PLXNB2O15031 1838 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 OATP04181 439 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ENO1P06733 434 aaKnown RBP11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ADCYAP1R1P41586 468 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ACOT2P49753 483 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 MFAP3P55082 362 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 INHBEP58166 350 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 KCNMA1Q12791 1236 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 KRT81Q14533 505 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ACCSLQ4AC99 568 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 FAXCQ5TGI0 409 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 DHX38Q92620 1227 aaKnown RBP11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 ACCSQ96QU6 501 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 POLR3FQ9H1D9 316 aaPredicted RBP11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 SLC45A1Q9Y2W3 748 aa11.03□□□□□ -0.64
CAPRIN1-201ENST00000341394 DYNC1LI2O43237 492 aaPredicted RBP11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 GRAP2O75791 330 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 AKAP3O75969 853 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 KCNJ2P63252 427 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 HSDL1Q3SXM5 330 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 PRAMEF19Q5SWL8 479 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 PHLDB3Q6NSJ2 640 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 ABHD15Q6UXT9 468 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 MAF1Q9H063 256 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 NGRNQ9NPE2 291 aaKnown RBP11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 SCOCQ9UIL1 159 aa11.02□□□□□ -0.64
CAPRIN1-201ENST00000341394 DENND3A2RUS2 1198 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 A8MUI8 341 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 FARP2O94887 1054 aaPredicted RBP11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 STBD1O95210 358 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 GH1P01241 217 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 ZNF844Q08AG5 666 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 SLMAPQ14BN4 828 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 COBLL1Q53SF7 1204 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 CCNYQ8ND76 341 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 PPWD1Q96BP3 646 aaKnown RBP11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 VCX3BQ9H321 246 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 ATP4AP20648 1035 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 ICAM3P32942 547 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 TPD52P55327 224 aaPredicted RBP11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 ARMC3Q5W041 872 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 TMEM154Q6P9G4 183 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 DARS2Q6PI48 645 aaKnown RBP11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 PPP4R3CPQ6ZMV5 832 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 ZNF720Q7Z2F6 126 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 ARMC2Q8NEN0 867 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 RNF34Q969K3 372 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 FAM149B1Q96BN6 582 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 TAS2R14Q9NYV8 317 aa11.02□□□□□ -0.65
CAPRIN1-201ENST00000341394 PDXKO00764 312 aa11.01□□□□□ -0.65
CAPRIN1-201ENST00000341394 MAPK13O15264 365 aa11.01□□□□□ -0.65
CAPRIN1-201ENST00000341394 SOX5P35711 763 aa11.01□□□□□ -0.65
CAPRIN1-201ENST00000341394 MARCKSL1P49006 195 aa11.01□□□□□ -0.65
CAPRIN1-201ENST00000341394 ALDH18A1P54886 795 aaKnown RBP11.01□□□□□ -0.65
CAPRIN1-201ENST00000341394 EIF3BP55884 814 aaKnown RBP11.01□□□□□ -0.65
CAPRIN1-201ENST00000341394 EMC2Q15006 297 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms