RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ARHGEF37A1IGU5 675 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 TULP1O00294 542 aaPredicted RBP16.58■□□□□ 0.24
VAPA-201ENST00000340541 CYB561D2O14569 222 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 SEC24AO95486 1093 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 NR3C1P04150 777 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 POU2F2P09086 479 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 OR4Q2P0C623 313 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 TMEM191BP0C7N4 346 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 PNPLA4P41247 253 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 CASP4P49662 377 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 MYBPC2Q14324 1141 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 DUOXA2Q1HG44 320 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 SV2CQ496J9 727 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 ZCWPW2Q504Y3 356 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 PPM1LQ5SGD2 360 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 TPGS2Q68CL5 300 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 CWF19L1Q69YN2 538 aaKnown RBP16.58■□□□□ 0.24
VAPA-201ENST00000340541 RTL10Q7L3V2 364 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 USP37Q86T82 979 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 TCEAL8Q8IYN2 117 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 FLCNQ8NFG4 579 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 OR10T2Q8NGX3 314 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 ZNF516Q92618 1163 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 CCDC127Q96BQ5 260 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 ANKRD36BP1Q96IX9 119 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 ZNF560Q96MR9 790 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 GSDMAQ96QA5 445 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 CGRRF1Q99675 332 aa16.58■□□□□ 0.24
VAPA-201ENST00000340541 OXCT2Q9BYC2 517 aaPredicted RBP16.58■□□□□ 0.24
VAPA-201ENST00000340541 OR6C75A6NL08 312 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 CCL16O15467 120 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 KIF20AO95235 890 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 TNNC2P02585 160 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
VAPA-201ENST00000340541 SRFP11831 508 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 LAMP2P13473 410 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 CLDN10P78369 228 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 RBP5P82980 135 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 NFIL3Q16649 462 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 WSCD1Q658N2 575 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 RNF19BQ6ZMZ0 732 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 TRAPPC11Q7Z392 1133 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 SIX5Q8N196 739 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 MYADMQ96S97 322 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 TMEM209Q96SK2 561 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 GDAP2Q9NXN4 497 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 AFF4Q9UHB7 1163 aaKnown RBP16.57■□□□□ 0.24
VAPA-201ENST00000340541 DSEQ9UL01 958 aa16.57■□□□□ 0.24
VAPA-201ENST00000340541 ANHXE9PGG2 379 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 CALUO43852 315 aaPredicted RBP16.56■□□□□ 0.24
VAPA-201ENST00000340541 KRT19P08727 400 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 CPB1P15086 417 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 BFSP1Q12934 665 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 GPR17Q13304 367 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 COBLL1Q53SF7 1204 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 ZNF658Q5TYW1 1059 aaPredicted RBP16.56■□□□□ 0.24
VAPA-201ENST00000340541 LIMS2Q7Z4I7 341 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 PARD3BQ8TEW8 1205 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 FNBP1Q96RU3 617 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 CRISPLD1Q9H336 500 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 MAFFQ9ULX9 164 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 L1RE1Q9UN81 338 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 INSL5Q9Y5Q6 135 aa16.56■□□□□ 0.24
VAPA-201ENST00000340541 LRRIQ3A6PVS8 624 aaPredicted RBP16.55■□□□□ 0.24
VAPA-201ENST00000340541 PI15O43692 258 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 KINO60870 393 aaKnown RBP16.55■□□□□ 0.24
VAPA-201ENST00000340541 PRPF40AO75400 957 aaKnown RBP16.55■□□□□ 0.24
VAPA-201ENST00000340541 SMC2O95347 1197 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 CST3P01034 146 aaPredicted RBP16.55■□□□□ 0.24
VAPA-201ENST00000340541 TNNI1P19237 187 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 PRCPP42785 496 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 DLG4P78352 724 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 NTHL1P78549 312 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 C1orf220Q5T0J3 134 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 PHLDB3Q6NSJ2 640 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 GRASPQ7Z6J2 395 aaPredicted RBP16.55■□□□□ 0.24
VAPA-201ENST00000340541 PDCL2Q8N4E4 241 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 HPDLQ96IR7 371 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 ZCWPW1Q9H0M4 648 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 CYP4F11Q9HBI6 524 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
VAPA-201ENST00000340541 MTMR11A4FU01 709 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 PRR23AA6NEV1 266 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 PRRG1O14668 218 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
VAPA-201ENST00000340541 XYLBO75191 536 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 AKAP3O75969 853 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 NR2F2P24468 414 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 ELF1P32519 619 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 UBE2HP62256 183 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 SOWAHAQ2M3V2 549 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 CENPPQ6IPU0 288 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 CLEC17AQ6ZS10 378 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 LRRTM3Q86VH5 581 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 OSTM1Q86WC4 334 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms