RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SLC7A6OSQ96CW6 309 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-202ENST00000339570 ARL8BQ9NVJ2 186 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 TCRBV7S3A2A0A539 114 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 CD19P15391 556 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 CALB2P22676 271 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 SERPINB3P29508 390 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 RFC5P40937 340 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 KPNB1Q14974 876 aaKnown RBP17.01■□□□□ 0.31
SCARB1-202ENST00000339570 CCNG2Q16589 344 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 ARMC2Q8NEN0 867 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 MAIP1Q8WWC4 291 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 ZNF395Q9H8N7 513 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-202ENST00000339570 POTEJP0CG39 1038 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 TPBGLP0DKB5 382 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 ALADP13716 330 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 GTF2H1P32780 548 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 PSMC5P62195 406 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 ZNF568Q3ZCX4 644 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 SLC25A41Q8N5S1 370 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 OR5B17Q8NGF7 314 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 STK32AQ8WU08 396 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 FAM111AQ96PZ2 611 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 APOBEC3GQ9HC16 384 aaKnown RBP17■□□□□ 0.31
SCARB1-202ENST00000339570 TAF1LQ8IZX4 1826 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 ATP8B3O60423 1300 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 EDF1O60869 148 aaKnown RBP17■□□□□ 0.31
SCARB1-202ENST00000339570 AVILO75366 819 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 FAM155BO75949 473 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 LRRC36Q1X8D7 754 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 FNBP1LQ5T0N5 605 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 MAB21L3Q8N8X9 362 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 TARS2Q9BW92 718 aaKnown RBP17■□□□□ 0.31
SCARB1-202ENST00000339570 ZFATQ9P243 1243 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 BTAF1O14981 1849 aa17■□□□□ 0.31
SCARB1-202ENST00000339570 GYG2O15488 501 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 LIASO43766 372 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 LINGO3P0C6S8 592 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 YWHAGP61981 247 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 DLGAP5Q15398 846 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 ANO7Q6IWH7 933 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 ZCCHC9Q8N567 271 aaKnown RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 WNK4Q96J92 1243 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 MECRQ9BV79 373 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 POLR3FQ9H1D9 316 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 RANBP17Q9H2T7 1088 aaKnown RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 CYP39A1Q9NYL5 469 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 DNALI1O14645 258 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 ZNF862O60290 1169 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 BGNP21810 368 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 MAN1A1P33908 653 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 POLE2P56282 527 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 MKRN3Q13064 507 aaKnown RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 KLF1Q13351 362 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 HIF1AQ16665 826 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 RNF220Q5VTB9 566 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 CENPUQ71F23 418 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 FBXO36Q8NEA4 188 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 HSPH1Q92598 858 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 MIPEPQ99797 713 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 CALN1Q9BXU9 219 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 SLC13A1Q9BZW2 595 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 ATP2A1O14983 1001 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 DCTN3O75935 186 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 BAG2O95816 211 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 CCNB1P14635 433 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 NR1H3Q13133 447 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 DNAJC24Q6P3W2 148 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 SYTL5Q8TDW5 730 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 CFAP36Q96G28 342 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 SHCBP1LQ9BZQ2 653 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 NXF1Q9UBU9 619 aaKnown RBP16.99■□□□□ 0.31
SCARB1-202ENST00000339570 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
SCARB1-202ENST00000339570 CD48P09326 243 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 UBTFL6P0CB48 400 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-202ENST00000339570 GLRA2P23416 452 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 KLRC2P26717 231 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 OGDHQ02218 1023 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 CAV1Q03135 178 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 KDSRQ06136 332 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 BIRC2Q13490 618 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 MON1BQ7L1V2 547 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 LMNTD2Q8IXW0 634 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 FAM71DQ8N9W8 422 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 DNAJC9Q8WXX5 260 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 CLPTM1LQ96KA5 538 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 PAFAH2Q99487 392 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 PEX10O60683 326 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 AP1G2O75843 785 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 TROVE2P10155 538 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCARB1-202ENST00000339570 ATP4AP20648 1035 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 CAP2P40123 477 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 RASSF2P50749 326 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 PDCD7Q8N8D1 485 aaKnown RBP16.98■□□□□ 0.31
SCARB1-202ENST00000339570 FEZF2Q8TBJ5 459 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 C10orf82Q8WW14 230 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 RSAD2Q8WXG1 361 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 SYT15Q9BQS2 421 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 RBAKQ9NYW8 714 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-202ENST00000339570 IKBKGQ9Y6K9 419 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms