RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 TFDP2Q14188 446 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 CHI3L2Q15782 390 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 DBN1Q16643 649 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 GEN1Q17RS7 908 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 KCNT1Q5JUK3 1230 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 PPIL6Q8IXY8 311 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 AGR3Q8TD06 166 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
RIOK3-201ENST00000339486 MXRA8Q9BRK3 442 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 SLC24A2Q9UI40 661 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 TBX20Q9UMR3 447 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 TMEM150BA6NC51 233 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 FSCN2O14926 492 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ETS1P14921 441 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ECE1P42892 770 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 KRT76Q01546 638 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 MORF4L2Q15014 288 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SLC45A4Q5BKX6 768 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SLFN12LQ6IEE8 588 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SPOPLQ6IQ16 392 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ANO5Q75V66 913 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 TRIML2Q8N7C3 387 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 EXD1Q8NHP7 514 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 VPS11Q9H270 941 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 FBXO28Q9NVF7 368 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 INO80B-WBP1J3KQ70 363 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 NOP56O00567 594 aaKnown RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 FCHO1O14526 889 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 FMO1Q01740 532 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 DSG1Q02413 1049 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 FAM228AQ86W67 206 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 APLFQ8IW19 511 aaPredicted RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SCUBE1Q8IWY4 988 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 RNF168Q8IYW5 571 aaPredicted RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 MAB21L3Q8N8X9 362 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 INO80BQ9C086 356 aaPredicted RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 POLR3FQ9H1D9 316 aaPredicted RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ARHGEF3Q9NR81 526 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ZC3H7BQ9UGR2 993 aaKnown RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ARFGEF2Q9Y6D5 1785 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SYNJ2BP-COX16A0A087WUM0 186 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 A6NJR5 290 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 PSAPP07602 524 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 SETSIPP0DME0 302 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 CEP120Q8N960 986 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 ADPGKQ9BRR6 497 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 COX16Q9P0S2 106 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 R3HDM2Q9Y2K5 976 aaKnown RBP13.08□□□□□ -0.32
RIOK3-201ENST00000339486 MYH15Q9Y2K3 1946 aa13.08□□□□□ -0.32
RIOK3-201ENST00000339486 FRMPD4Q14CM0 1322 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 HSPA4LO95757 839 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 LDHAP00338 332 aaKnown RBP13.07□□□□□ -0.32
RIOK3-201ENST00000339486 GARSP41250 739 aaKnown RBP13.07□□□□□ -0.32
RIOK3-201ENST00000339486 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
RIOK3-201ENST00000339486 DEUP1Q05D60 604 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 PDK4Q16654 411 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 PARP6Q2NL67 630 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 KRT80Q6KB66 452 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 LLGL2Q6P1M3 1020 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 VSTM1Q6UX27 236 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 PODNQ7Z5L7 613 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 NDUFAF2Q8N183 169 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 ZCCHC9Q8N567 271 aaKnown RBP13.07□□□□□ -0.32
RIOK3-201ENST00000339486 SPATA18Q8TC71 538 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 ZNF570Q96NI8 536 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 DDX50Q9BQ39 737 aaKnown RBP13.07□□□□□ -0.32
RIOK3-201ENST00000339486 PCDHA2Q9Y5H9 948 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 DDTLA6NHG4 134 aaPredicted RBP13.07□□□□□ -0.32
RIOK3-201ENST00000339486 MED7O43513 233 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 AHCYL1O43865 530 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 PYGBP11216 843 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 CYP3A7P24462 503 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 BCAR1P56945 870 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 ATP13A4Q4VNC1 1196 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 CYP4A22Q5TCH4 519 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 TRABD2AQ86V40 505 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 TRIM50Q86XT4 487 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 CCNYQ8ND76 341 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 MIS12Q9H081 205 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 LRMDAQ9H2I8 198 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 SAR1AQ9NR31 198 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 STRIP2Q9ULQ0 834 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 ACTL7BQ9Y614 415 aa13.07□□□□□ -0.32
RIOK3-201ENST00000339486 EDF1O60869 148 aaKnown RBP13.07□□□□□ -0.32
RIOK3-201ENST00000339486 SNRPAP09012 282 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms