RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 BRSK2Q8IWQ3 736 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SIK2Q9H0K1 926 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ATP8B3O60423 1300 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 MEFVO15553 781 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 KCNN4O15554 427 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 NOVP48745 357 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 GNASQ5JWF2 1037 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ABHD15Q6UXT9 468 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ACOT1Q86TX2 421 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 BBS5Q8N3I7 341 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 RSRC1Q96IZ7 334 aaKnown RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CCT8L2Q96SF2 557 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 KLK14Q9P0G3 267 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 PPME1Q9Y570 386 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SPATA31C2B4DYI2 1134 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 COPS5Q92905 334 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 XPO6Q96QU8 1125 aaKnown RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 TMEM134Q9H6X4 195 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 GBA2Q9HCG7 927 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CPA4Q9UI42 421 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 RBAK-RBAKDNI3L0D1 243 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 MOB2Q70IA6 237 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CLEC4DQ8WXI8 215 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CYTH2Q99418 400 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ROPN1BQ9BZX4 212 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ROPN1Q9HAT0 212 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 RAB6BQ9NRW1 208 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 DPP3Q9NY33 737 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SENP1Q9P0U3 644 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SALL4Q9UJQ4 1053 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 MAFO75444 373 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 PYGMP11217 842 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 MAGEA4P43358 317 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 HIF1AQ16665 826 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 PID1Q7Z2X4 250 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CPSF3Q9UKF6 684 aaKnown RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF862O60290 1169 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 LSM8O95777 96 aaKnown RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 AFAP1L2Q8N4X5 818 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 EXD1Q8NHP7 514 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 PPP4R1Q8TF05 950 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CPB2Q96IY4 423 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 EPN3Q9H201 632 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 GDF3Q9NR23 364 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 TAS2R14Q9NYV8 317 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 H3BRJ5 948 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CIB2O75838 187 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 MAGEA9P43362 315 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ASPHQ12797 758 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CCNG2Q16589 344 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 HSDL1Q3SXM5 330 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SV2CQ496J9 727 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 LRRC31Q6UY01 552 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 TBC1D1Q86TI0 1168 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 FAM71AQ8IYT1 594 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF473Q8WTR7 871 aaKnown RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 FAM84AQ96KN4 292 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 GMLQ99445 158 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 FAM153BP0C7A2 387 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ZFXP17010 805 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 ATICP31939 592 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 STIP1P31948 543 aaKnown RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 DEUP1Q05D60 604 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 FAM153CQ494X1 144 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 THOC1Q96FV9 657 aaKnown RBP6.62□□□□□ -1.35
PRKDC-202ENST00000338368 FAM153AQ9UHL3 310 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 PHF20L1A8MW92 1017 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 MAP2K7O14733 419 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SRGAP2BP0DMP2 458 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 PSMC4P43686 418 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SULT1E1P49888 294 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 BOLA3Q53S33 107 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 SYCP2LQ5T4T6 812 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 KIAA1841Q6NSI8 718 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 CNPY4Q8N129 248 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 OR5B17Q8NGF7 314 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 TRIM55Q9BYV6 548 aa6.62□□□□□ -1.35
PRKDC-202ENST00000338368 PDHXO00330 501 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SPAG7O75391 227 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 LSP1P33241 339 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 ADCYAP1R1P41586 468 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 C1QBPQ07021 282 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SPIRE1Q08AE8 756 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 WRAP73Q9P2S5 460 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 EGFRP00533 1210 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CALCAP01258 141 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 MCF2P10911 925 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 AMHR2Q16671 573 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 EFHC1Q5JVL4 640 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CD302Q8IX05 232 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CLMNQ96JQ2 1002 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 RAB3IPQ96QF0 476 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 NKRFO15226 690 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 PTPN11Q06124 597 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 MCL1Q07820 350 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 E2F5Q15329 346 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 NOTUMQ6P988 496 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 VCPIP1Q96JH7 1222 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms