RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TLK1Q9UKI8 766 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 WASF2Q9Y6W5 498 aa13.89□□□□□ -0.19
COL2A1-201ENST00000337299 SRGAP2CP0DJJ0 459 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 TYK2P29597 1187 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 LIN52Q52LA3 116 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 FAXCQ5TGI0 409 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 PLEKHA7Q6IQ23 1121 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 LRRC8EQ6NSJ5 796 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 DEFB107AQ8IZN7 70 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 LENG1Q96BZ8 264 aaPredicted RBP13.88□□□□□ -0.19
COL2A1-201ENST00000337299 CLPTM1LQ96KA5 538 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 FAM213AQ9BRX8 229 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL2A1-201ENST00000337299 KRT82Q9NSB4 513 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 GINS2Q9Y248 185 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 PXDNQ92626 1479 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 ZBTB5O15062 677 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 RAG1P15918 1043 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 PMLP29590 882 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 C11orf63Q6NUN7 778 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 LAYNQ6UX15 382 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 B3GNT6Q6ZMB0 384 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 RIPOR1Q6ZS17 1223 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 C1orf131Q8NDD1 294 aaKnown RBP13.88□□□□□ -0.19
COL2A1-201ENST00000337299 USP6NLQ92738 828 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 TLCD1Q96CP7 247 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 SPC25Q9HBM1 224 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 LRRC4BQ9NT99 713 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 ARL8BQ9NVJ2 186 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 CES2O00748 559 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 AKAP10O43572 662 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 MAP3K6O95382 1288 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 SLC30A10Q6XR72 485 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 EXOC8Q8IYI6 725 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 ASAP3Q8TDY4 903 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 OXNAD1Q96HP4 312 aaPredicted RBP13.88□□□□□ -0.19
COL2A1-201ENST00000337299 LRMDAQ9H2I8 198 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 C12orf65Q9H3J6 166 aaKnown RBP13.88□□□□□ -0.19
COL2A1-201ENST00000337299 RAB6BQ9NRW1 208 aa13.88□□□□□ -0.19
COL2A1-201ENST00000337299 FAM237BA0A1B0GVD1 139 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 hCG_1984214I3L0E3 225 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ZSCAN5DPP0CG00 497 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 TAC1P20366 129 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 RGS2P41220 211 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 NPEPPSP55786 919 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 QRICH1Q2TAL8 776 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 SLC45A4Q5BKX6 768 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 PATL1Q86TB9 770 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ZNF713Q8N859 430 aaPredicted RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 CYGBQ8WWM9 190 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 NSUN4Q96CB9 384 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 CSRNP1Q96S65 589 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ARHGEF3Q9NR81 526 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 WDR35Q9P2L0 1181 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 TAGLN3Q9UI15 199 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ATP11BQ9Y2G3 1177 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 A0A0A6YYK5 440 aaPredicted RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 MAN1A2O60476 641 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ANPEPP15144 967 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 STX1BP61266 288 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 MRPS15P82914 257 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 SLC25A3Q00325 362 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 SLC12A1Q13621 1099 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 BMPR2Q13873 1038 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 TFDP1Q14186 410 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 PARP6Q2NL67 630 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 KRT39Q6A163 491 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 SNX25Q9H3E2 840 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 GTSE1Q9NYZ3 720 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 STARD13Q9Y3M8 1113 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 A6NJR5 290 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 GNGT2O14610 69 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 KRT75O95678 551 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ALAS1P13196 640 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 OSTNP61366 133 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 TFAMQ00059 246 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 LBRQ14739 615 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 LPCAT4Q643R3 524 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 C4orf50Q6ZRC1 276 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ZCCHC23Q6ZST2 131 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 FBXO36Q8NEA4 188 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ECSITQ9BQ95 431 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 TMEM121Q9BTD3 319 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 MTFR1LQ9H019 292 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 ZC3H7BQ9UGR2 993 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 FKBP6O75344 327 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 PSMC3P17980 439 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 GNA15P30679 374 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 HDAC4P56524 1084 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 EIF3EP60228 445 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 PLOD1Q02809 727 aaPredicted RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 KBTBD12Q3ZCT8 623 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms