RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 LRRC71Q8N4P6 559 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 DDX50Q9BQ39 737 aaKnown RBP14.69□□□□□ -0.06
SF1-202ENST00000334944 METTL5Q9NRN9 209 aaKnown RBP14.69□□□□□ -0.06
SF1-202ENST00000334944 GRHL1Q9NZI5 618 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 ZNF112Q9UJU3 913 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 GTF3C4Q9UKN8 822 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 ZNFX1Q9P2E3 1918 aaKnown RBP14.69□□□□□ -0.06
SF1-202ENST00000334944 ATP8B3O60423 1300 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 MIF4GDA9UHW6 222 aaKnown RBP14.69□□□□□ -0.06
SF1-202ENST00000334944 BHMG1C9JSJ3 638 aaPredicted RBP14.69□□□□□ -0.06
SF1-202ENST00000334944 MAPK13O15264 365 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 ENTPD5O75356 428 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 ERFP50548 548 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 VGLL4Q14135 290 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 WDR44Q5JSH3 913 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 WDR78Q5VTH9 848 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 NUDCD1Q96RS6 583 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 PPP1R16BQ96T49 567 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 CHST7Q9NS84 486 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 PCDHB4Q9Y5E5 795 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 DNAH12Q6ZR08 3092 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 OATP04181 439 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 UBA1P22314 1058 aaKnown RBP14.69□□□□□ -0.06
SF1-202ENST00000334944 MMP13P45452 471 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 GADL1Q6ZQY3 521 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 SLC7A3Q8WY07 619 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 SEC14L1Q92503 715 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 SENP7Q9BQF6 1050 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 EPB41L4BQ9H329 900 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 AFG3L2Q9Y4W6 797 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 EXTL3O43909 919 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 KLC1Q07866 573 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 TRAPPC12Q8WVT3 735 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 PSPC1Q8WXF1 523 aaKnown RBP14.68□□□□□ -0.06
SF1-202ENST00000334944 FGD4Q96M96 766 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 ASB3Q9Y575 518 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 NUB1Q9Y5A7 615 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 RLFQ13129 1914 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 MROH7Q68CQ1 1323 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 MAFGO15525 162 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 CSDE1O75534 798 aaKnown RBP14.68□□□□□ -0.06
SF1-202ENST00000334944 GH1P01241 217 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 PMS2P54278 862 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 GALNTL6Q49A17 601 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 ZFYVE27Q5T4F4 411 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 MCOLN2Q8IZK6 566 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 RDM1Q8NG50 284 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 ACSF2Q96CM8 615 aaPredicted RBP14.68□□□□□ -0.06
SF1-202ENST00000334944 PCYT2Q99447 389 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 WNT8AQ9H1J5 351 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 HOXC10Q9NYD6 342 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 LNPEPQ9UIQ6 1025 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 R3HDM2Q9Y2K5 976 aaKnown RBP14.68□□□□□ -0.06
SF1-202ENST00000334944 PCDHA3Q9Y5H8 950 aa14.68□□□□□ -0.06
SF1-202ENST00000334944 MYPNQ86TC9 1320 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 ADM5C9JUS6 153 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 GNAZP19086 355 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 TARSP26639 723 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 TPP2P29144 1249 aaPredicted RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 COILP38432 576 aaPredicted RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 NSFP46459 744 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 MUM1Q2TAK8 710 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 ZACNQ401N2 412 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 ZNF449Q6P9G9 518 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 KCNK9Q9NPC2 374 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 PHIPQ8WWQ0 1821 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 C19orf81C9J6K1 198 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 PEX11AO75192 247 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 CST3P01034 146 aaPredicted RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 C4BPAP04003 597 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 ETS2P15036 469 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 TCF4P15884 667 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 GARTP22102 1010 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 MAGEA10P43363 369 aaPredicted RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 PTDSS1P48651 473 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 HADHBP55084 474 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 SNRPFP62306 86 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 MRPS35P82673 323 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 MGAT5Q09328 741 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 SIX1Q15475 284 aaPredicted RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 ATP13A4Q4VNC1 1196 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 SGO2Q562F6 1265 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 C1QTNF12Q5T7M4 302 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 XRRA1Q6P2D8 792 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 SCARA5Q6ZMJ2 495 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 USP37Q86T82 979 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 NSRP1Q9H0G5 558 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 DIS3Q9Y2L1 958 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 CEP350Q5VT06 3117 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 PI4K2BG5E9Z4 385 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 USP2O75604 605 aaPredicted RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 SUN1O94901 812 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 NPTXRO95502 500 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 FDX1P10109 184 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 UNGP13051 313 aaPredicted RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 ATP6V1C1P21283 382 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 CTNNA2P26232 953 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 CHRNA3P32297 505 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms