RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CHP1Q99653 195 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 ARHGAP20Q9P2F6 1191 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 TIMM13Q9Y5L4 95 aaPredicted RBP22.98■■□□□ 1.27
TPM1-204ENST00000334895 VWA8A3KMH1 1905 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 PRKCIP41743 596 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 NDST1P52848 882 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 YWHAEP62258 255 aaKnown RBP22.97■■□□□ 1.27
TPM1-204ENST00000334895 CCZ1BP86790 482 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 CCZ1P86791 482 aaPredicted RBP22.97■■□□□ 1.27
TPM1-204ENST00000334895 KCNT2Q6UVM3 1135 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 ADGRF2Q8IZF7 708 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 ELOVL4Q9GZR5 314 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 FAM124BQ9H5Z6 455 aaPredicted RBP22.97■■□□□ 1.27
TPM1-204ENST00000334895 BARX2Q9UMQ3 279 aaPredicted RBP22.97■■□□□ 1.27
TPM1-204ENST00000334895 GRXCR1A8MXD5 290 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 TLL1O43897 1013 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 TADA2AO75478 443 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 EFEMP2O95967 443 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 WARSP23381 471 aaKnown RBP22.97■■□□□ 1.27
TPM1-204ENST00000334895 ALDH7A1P49419 539 aaKnown RBP22.97■■□□□ 1.27
TPM1-204ENST00000334895 RABGGTBP53611 331 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 RAD23BP54727 409 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 ORC1Q13415 861 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 ZNF394Q53GI3 561 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 SLC47A2Q86VL8 602 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 COLGALT1Q8NBJ5 622 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 OLIG1Q8TAK6 271 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 BAG1Q99933 345 aaPredicted RBP22.97■■□□□ 1.27
TPM1-204ENST00000334895 GPR62Q9BZJ7 368 aa22.97■■□□□ 1.27
TPM1-204ENST00000334895 GABRDO14764 452 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 CYP11A1P05108 521 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 ODC1P11926 461 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 LAG3P18627 525 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 CDK17Q00537 523 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 TSR1Q2NL82 804 aaKnown RBP22.96■■□□□ 1.27
TPM1-204ENST00000334895 SPOUT1Q5T280 376 aaKnown RBP22.96■■□□□ 1.27
TPM1-204ENST00000334895 SMYD5Q6GMV2 418 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 SLC39A11Q8N1S5 342 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 FIBCD1Q8N539 461 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 IGSF21Q96ID5 467 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 SYT11Q9BT88 431 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 VN1R3Q9BXE9 311 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 HAUS4Q9H6D7 363 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 PCDHB8Q9UN66 801 aa22.96■■□□□ 1.27
TPM1-204ENST00000334895 SERPING1P05155 500 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 FAM163BP0C2L3 166 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 LMO2P25791 158 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 FUT10Q6P4F1 479 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 NOP9Q86U38 636 aaKnown RBP22.95■■□□□ 1.26
TPM1-204ENST00000334895 SLC4A11Q8NBS3 891 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 OR6B3Q8NGW1 331 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 EPS8L1Q8TE68 723 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 CLP1Q92989 425 aaKnown RBP22.95■■□□□ 1.26
TPM1-204ENST00000334895 ZNF558Q96NG5 402 aa22.95■■□□□ 1.26
TPM1-204ENST00000334895 ZNHIT6Q9NWK9 470 aaKnown RBP22.95■■□□□ 1.26
TPM1-204ENST00000334895 NOCTQ9UK39 431 aaKnown RBP22.95■■□□□ 1.26
TPM1-204ENST00000334895 CYP11B1P15538 503 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 TKTP29401 623 aaKnown RBP22.94■■□□□ 1.26
TPM1-204ENST00000334895 PTK2Q05397 1052 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 KLHL30Q0D2K2 578 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 ZNF571Q7Z3V5 609 aaPredicted RBP22.94■■□□□ 1.26
TPM1-204ENST00000334895 FMNL3Q8IVF7 1028 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 TMEM86AQ8N2M4 240 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 TTC39CQ8N584 583 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 SLC20A1Q8WUM9 679 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 RTP3Q9BQQ7 232 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 ZSWIM1Q9BR11 485 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 STXBP5LQ9Y2K9 1186 aa22.94■■□□□ 1.26
TPM1-204ENST00000334895 SOWAHDA6NJG2 315 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 MYOGP15173 224 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 TYMPP19971 482 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 GNL1P36915 607 aaPredicted RBP22.93■■□□□ 1.26
TPM1-204ENST00000334895 UNC93AQ86WB7 457 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 RNF168Q8IYW5 571 aaPredicted RBP22.93■■□□□ 1.26
TPM1-204ENST00000334895 DDX1Q92499 740 aaKnown RBP22.93■■□□□ 1.26
TPM1-204ENST00000334895 SNX25Q9H3E2 840 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 DPEP3Q9H4B8 488 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 SF3B1O75533 1304 aaKnown RBP eCLIP22.93■■□□□ 1.269e-6■■■■■ 68.9
TPM1-204ENST00000334895 A8MXQ7 604 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 TRAPPC3O43617 180 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 ARHGEF15O94989 841 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 EIF4A3P38919 411 aaKnown RBP22.93■■□□□ 1.26
TPM1-204ENST00000334895 FAM171A1Q5VUB5 890 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 CYP26C1Q6V0L0 522 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 TAS1R1Q7RTX1 841 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 CCDC112Q8NEF3 446 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 TFAP2BQ92481 460 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 TMEM176AQ96HP8 235 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 B3GALT6Q96L58 329 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 NT5C1AQ9BXI3 368 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 DSEQ9UL01 958 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 NLRC5Q86WI3 1866 aa22.93■■□□□ 1.26
TPM1-204ENST00000334895 SYN3O14994 580 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 PAEPP09466 180 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 PDGFRBP09619 1106 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 CCDC172P0C7W6 258 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 CHRNB2P17787 502 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 FGFR3P22607 806 aa22.92■■□□□ 1.26
TPM1-204ENST00000334895 MAPK8IP2Q13387 824 aaPredicted RBP22.92■■□□□ 1.26
TPM1-204ENST00000334895 MTF1Q14872 753 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms