RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CNPP09543 421 aaKnown RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 UCHL3P15374 230 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CA8P35219 290 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 KLK7P49862 253 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 GUCY2FP51841 1108 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 YARSP54577 528 aaKnown RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CLDN10P78369 228 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 UPP1Q16831 310 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 LEXMQ3ZCV2 418 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 TJAP1Q5JTD0 557 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 FUT10Q6P4F1 479 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 WDR59Q6PJI9 974 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 APBB1IPQ7Z5R6 666 aaPredicted RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 EHBP1Q8NDI1 1231 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 PARD3BQ8TEW8 1205 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 MSLNLQ96KJ4 702 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 FAM84AQ96KN4 292 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CCDC42Q96M95 316 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 EIF3CQ99613 913 aaKnown RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 TMEM8AQ9HCN3 771 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 LUC7LQ9NQ29 371 aaKnown RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CHST7Q9NS84 486 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 TUBGCP4Q9UGJ1 667 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CDH22Q9UJ99 828 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CPSF3Q9UKF6 684 aaKnown RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 IRAK3Q9Y616 596 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CITO14578 2027 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 SOWAHDA6NJG2 315 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 TADA2AO75478 443 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 NDUFA10O95299 355 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 SERPING1P05155 500 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 ADRB2P07550 413 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 TERF1P54274 439 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 POLR2FP61218 127 aaKnown RBP17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 CYP24A1Q07973 514 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 PSMD6Q15008 389 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 ZBTB6Q15916 424 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 KRT39Q6A163 491 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 SCARA3Q6AZY7 606 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 TRIM65Q6PJ69 517 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 SPAG5Q96R06 1193 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 TOPORSQ9NS56 1045 aaPredicted RBP17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 MYO1AQ9UBC5 1043 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 COQ4Q9Y3A0 265 aa17.64■□□□□ 0.41
PDLIM1-201ENST00000329399 GRXCR2A6NFK2 248 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 GFPT2O94808 682 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 TNNT1P13805 278 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 IL9P15248 144 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 EPCAMP16422 314 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 RPL17P18621 184 aaKnown RBP17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 BRCC3P46736 316 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 RTP2Q5QGT7 225 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 RAD9BQ6WBX8 426 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 REXO1L1PQ8IX06 675 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 RDH13Q8NBN7 331 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 SAAL1Q96ER3 474 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 KLHL5Q96PQ7 755 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 CRACR2AQ9BSW2 395 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 HERC2P3Q9BVR0 1158 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 APOL5Q9BWW9 433 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 STK33Q9BYT3 514 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 NHEJ1Q9H9Q4 299 aaPredicted RBP17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 HCFC2Q9Y5Z7 792 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 GOLGA8IPA6NC78 632 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 LRRC53A6NM62 1247 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 GOLGA8JA6NMD2 632 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 NCK2O43639 380 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 B3GAT3O94766 335 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 LCA5LO95447 670 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 NDUFV1P49821 464 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 MXI1P50539 228 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 DSG1Q02413 1049 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 SPA17Q15506 151 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 C10orf76Q5T2E6 689 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 DPY19L2P1Q6NXN4 242 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 SYCE2Q6PIF2 218 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 PRSS55Q6UWB4 352 aaPredicted RBP17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 SLC22A17Q8WUG5 538 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 FAM212AQ96EL1 285 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 FNBP1Q96RU3 617 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 TRMT1Q9NXH9 659 aaKnown RBP17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 APEX2Q9UBZ4 518 aa17.63■□□□□ 0.41
PDLIM1-201ENST00000329399 PPEF2O14830 753 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 TEX28O15482 410 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 SLC9A1P19634 815 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 JADE1Q6IE81 842 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 PTCRAQ6ISU1 281 aaPredicted RBP17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 DCLRE1AQ6PJP8 1040 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 TMEM184AQ6ZMB5 413 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 TOGARAM2Q6ZUX3 1019 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 CBWD2Q8IUF1 395 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 C17orf53Q8N3J3 647 aaPredicted RBP17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 C12orf76Q8N812 135 aaPredicted RBP17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 KIF18AQ8NI77 898 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 PPP2R3CQ969Q6 453 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 TSGA10Q9BZW7 698 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 INTS2Q9H0H0 1204 aaKnown RBP17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 DEF6Q9H4E7 631 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms