RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 AGAP1Q9UPQ3 857 aa4.84□□□□□ -1.63
SKP1-201ENST00000328392 CHST2Q9Y4C5 530 aa4.84□□□□□ -1.63
SKP1-201ENST00000328392 USP15Q9Y4E8 981 aaPredicted RBP4.84□□□□□ -1.63
SKP1-201ENST00000328392 TMEM233B4DJY2 109 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 NCR1O76036 304 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 KIF20AO95235 890 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 RARBP10826 455 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 PTGS2P35354 604 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 FMO1Q01740 532 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 PDCD4Q53EL6 469 aaKnown RBP4.83□□□□□ -1.64
SKP1-201ENST00000328392 KLHDC7AQ5VTJ3 777 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 XRRA1Q6P2D8 792 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 DRICH1Q6PGQ1 229 aaPredicted RBP4.83□□□□□ -1.64
SKP1-201ENST00000328392 PCSK4Q6UW60 755 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 SLC30A10Q6XR72 485 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 GDF7Q7Z4P5 450 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 MORC1Q86VD1 984 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 SESTD1Q86VW0 696 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 SLC15A4Q8N697 577 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 PDPRQ8NCN5 879 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 FBXO41Q8TF61 875 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 ANKS1AQ92625 1134 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 MARS2Q96GW9 593 aaKnown RBP4.83□□□□□ -1.64
SKP1-201ENST00000328392 CCDC138Q96M89 665 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 KLHL32Q96NJ5 620 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 STRBPQ96SI9 672 aaKnown RBP4.83□□□□□ -1.64
SKP1-201ENST00000328392 PSMD1Q99460 953 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 MYD88Q99836 296 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 ZSWIM1Q9BR11 485 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 TTPALQ9BTX7 342 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 SLITRK6Q9H5Y7 841 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 SIDT1Q9NXL6 827 aaKnown RBP4.83□□□□□ -1.64
SKP1-201ENST00000328392 TBC1D30Q9Y2I9 924 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 HS3ST4Q9Y661 456 aa4.83□□□□□ -1.64
SKP1-201ENST00000328392 A0A087X1B8 175 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 CENPVL1A0A0U1RR11 272 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 POM121BA6NF01 834 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 F8W8V4 182 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 BTN3A1O00481 513 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 TBC1D4O60343 1298 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 NDUFA10O95299 355 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 LDHAP00338 332 aaKnown RBP4.82□□□□□ -1.64
SKP1-201ENST00000328392 AK2P54819 239 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 INHBCP55103 352 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 RPS16P62249 146 aaKnown RBP4.82□□□□□ -1.64
SKP1-201ENST00000328392 FSTL1Q12841 308 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 CTBP1Q13363 440 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 KIF22Q14807 665 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 TIGD2Q4W5G0 525 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 C10orf62Q5T681 223 aaPredicted RBP4.82□□□□□ -1.64
SKP1-201ENST00000328392 FAM102AQ5T9C2 384 aaPredicted RBP4.82□□□□□ -1.64
SKP1-201ENST00000328392 ZNF783Q6ZMS7 281 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 MRGPRGQ86SM5 289 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 FAM186BQ8IYM0 893 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 SYNE4Q8N205 404 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 FAM46DQ8NEK8 389 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 OR6B3Q8NGW1 331 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 PROKR1Q8TCW9 393 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 SLC46A2Q9BY10 475 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 TINAGL1Q9GZM7 467 aaPredicted RBP4.82□□□□□ -1.64
SKP1-201ENST00000328392 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 ANKFY1Q9P2R3 1169 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 TAGLN3Q9UI15 199 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 CLCA2Q9UQC9 943 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 DMTF1Q9Y222 760 aa4.82□□□□□ -1.64
SKP1-201ENST00000328392 WDR33Q9C0J8 1336 aaKnown RBP4.81□□□□□ -1.64
SKP1-201ENST00000328392 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 E9PLN8 166 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 MYO1CO00159 1063 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 MYO1FO00160 1098 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 NCK2O43639 380 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 ABHD16AO95870 558 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 GRPP07492 148 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 FCER1AP12319 257 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 LAG3P18627 525 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 MGAT1P26572 445 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 UCP3P55916 312 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 HABP2Q14520 560 aaPredicted RBP4.81□□□□□ -1.64
SKP1-201ENST00000328392 LAIR1Q6GTX8 287 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 KCNV1Q6PIU1 500 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 LRRC55Q6ZSA7 311 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 USP37Q86T82 979 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 DNAJC5GQ8N7S2 189 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 ACRBPQ8NEB7 543 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 RAPGEF4Q8WZA2 1011 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 PHKBQ93100 1093 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 RIPOR3Q96MK2 946 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 DCLRE1CQ96SD1 692 aaKnown RBP4.81□□□□□ -1.64
SKP1-201ENST00000328392 AGAP2Q99490 1192 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 VKORC1Q9BQB6 163 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 STK31Q9BXU1 1019 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 PCGF6Q9BYE7 350 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 TRIM54Q9BYV2 358 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 TTYH3Q9C0H2 523 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 PNPLA8Q9NP80 782 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 GJB4Q9NTQ9 266 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
SKP1-201ENST00000328392 AFF4Q9UHB7 1163 aaKnown RBP4.81□□□□□ -1.64
SKP1-201ENST00000328392 ZDHHC8Q9ULC8 765 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms