RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TRMT5Q32P41 509 aaKnown RBP13.47□□□□□ -0.25
CCDC60-201ENST00000327554 STXBP4Q6ZWJ1 553 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 RAPH1Q70E73 1250 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 GSTA5Q7RTV2 222 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 TMPRSS6Q8IU80 811 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ZBED8Q8IZ13 594 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 NME8Q8N427 588 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 BANPQ8N9N5 519 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 CYP2W1Q8TAV3 490 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 TTC1Q99614 292 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 NMUR2Q9GZQ4 415 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 PCIF1Q9H4Z3 704 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
CCDC60-201ENST00000327554 NFASCO94856 1347 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 CAPN14A8MX76 684 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 HNRNPRO43390 633 aaKnown RBP13.46□□□□□ -0.25
CCDC60-201ENST00000327554 SLITRK3O94933 977 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 ITGA2BP08514 1039 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 GEMIN4P57678 1058 aaKnown RBP13.46□□□□□ -0.25
CCDC60-201ENST00000327554 AP2B1P63010 937 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.25
CCDC60-201ENST00000327554 GRM2Q14416 872 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 PRKD1Q15139 912 aaPredicted RBP13.46□□□□□ -0.25
CCDC60-201ENST00000327554 CFAP157Q5JU67 520 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 ODR4Q5SWX8 454 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 TREML1Q86YW5 311 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 PPM1KQ8N3J5 372 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 RBM15BQ8NDT2 890 aaKnown RBP13.46□□□□□ -0.25
CCDC60-201ENST00000327554 CLPTM1LQ96KA5 538 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.25
CCDC60-201ENST00000327554 RABGEF1Q9UJ41 708 aa13.46□□□□□ -0.25
CCDC60-201ENST00000327554 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.26
CCDC60-201ENST00000327554 H3BRJ5 948 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 ATP9BO43861 1147 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 TM7SF2O76062 418 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 MYL2P10916 166 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 SREBF1P36956 1147 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 BPIFB4P59827 614 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 SEPT7Q16181 437 aaKnown RBP13.46□□□□□ -0.26
CCDC60-201ENST00000327554 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 SLC30A10Q6XR72 485 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 ALYREFQ86V81 257 aaKnown RBP13.46□□□□□ -0.26
CCDC60-201ENST00000327554 PDSS2Q86YH6 399 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 KCTD17Q8N5Z5 321 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 ZSWIM2Q8NEG5 633 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 LENG1Q96BZ8 264 aaPredicted RBP13.46□□□□□ -0.26
CCDC60-201ENST00000327554 DHRS4Q9BTZ2 278 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 TMEM117Q9H0C3 514 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 GPAMQ9HCL2 828 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 SLC7A8Q9UHI5 535 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 ZNF510Q9Y2H8 683 aa13.46□□□□□ -0.26
CCDC60-201ENST00000327554 CLUHO75153 1309 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 GOLGA8RI6L899 631 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 BANF1O75531 89 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 BAG2O95816 211 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 DHRS4L1P0CG22 281 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 ETS1P14921 441 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
CCDC60-201ENST00000327554 LLGL2Q6P1M3 1020 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 TPH2Q8IWU9 490 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 ULK2Q8IYT8 1036 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 CYTH2Q99418 400 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 KLF6Q99612 283 aaPredicted RBP13.45□□□□□ -0.26
CCDC60-201ENST00000327554 TUFT1Q9NNX1 390 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 ZNF862O60290 1169 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 OR6B1O95007 311 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 CIITAP33076 1130 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 MXI1P50539 228 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 TAS2R40P59535 323 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 ADGRD1Q6QNK2 874 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 ADGRG6Q86SQ4 1221 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 SATL1Q86VE3 508 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 CHSY1Q86X52 802 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 OR6Y1Q8NGX8 325 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 SEMA4DQ92854 862 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
CCDC60-201ENST00000327554 MPP4Q96JB8 637 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 GPR101Q96P66 508 aaPredicted RBP13.45□□□□□ -0.26
CCDC60-201ENST00000327554 EPB41L1Q9H4G0 881 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 AVENQ9NQS1 362 aaPredicted RBP13.45□□□□□ -0.26
CCDC60-201ENST00000327554 FETUBQ9UGM5 382 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 DNPEPQ9ULA0 475 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
CCDC60-201ENST00000327554 SMIM31A0A1B0GVY4 71 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 LIASO43766 372 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 OPHN1O60890 802 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 CIB2O75838 187 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 PIAS1O75925 651 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 CALCAP01258 141 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 ENO1P06733 434 aaKnown RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 TPP2P29144 1249 aaPredicted RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 TM4SF1P30408 202 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 ETV4P43268 484 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 ARSEP51690 589 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 MFAP3P55082 362 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 MSLNQ13421 630 aaPredicted RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 MAP7Q14244 749 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms