RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TLR3O15455 904 aaKnown RBP14.19□□□□□ -0.14
SKA3-202ENST00000314759 ATP9AO75110 1047 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 SP100P23497 879 aaPredicted RBP14.19□□□□□ -0.14
SKA3-202ENST00000314759 BRD2P25440 801 aaKnown RBP14.19□□□□□ -0.14
SKA3-202ENST00000314759 PSMC5P62195 406 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 NOMO3P69849 1222 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 AOC3Q16853 763 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 LIN9Q5TKA1 542 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 HHATQ5VTY9 493 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 SPOPLQ6IQ16 392 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 CCDC125Q86Z20 511 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 ZBED8Q8IZ13 594 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 GPD1LQ8N335 351 aa14.19□□□□□ -0.14
SKA3-202ENST00000314759 GLIS2Q9BZE0 524 aaPredicted RBP14.19□□□□□ -0.14
SKA3-202ENST00000314759 CPSF2Q9P2I0 782 aaKnown RBP14.19□□□□□ -0.14
SKA3-202ENST00000314759 THSD7AQ9UPZ6 1657 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 ALOX15BO15296 676 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 PLA2G6O60733 806 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 NPTXRO95502 500 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 CCNE2O96020 404 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 RASSF2P50749 326 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 BPIFB4P59827 614 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 KLC1Q07866 573 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 KHDC1Q4VXA5 237 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 PLEKHA7Q6IQ23 1121 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 LVRNQ6Q4G3 990 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 ANO5Q75V66 913 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 NLRP9Q7RTR0 991 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 FAM160B2Q86V87 743 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 ALLCQ8N6M5 410 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 MRPL47Q9HD33 250 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 HNRNPDLO14979 420 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 BANF1O75531 89 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 KRT4P19013 534 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 RPS6KA3P51812 740 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 NOP14P78316 857 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 MAPK6Q16659 721 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 EAPPQ56P03 285 aaPredicted RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 SLC45A4Q5BKX6 768 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 WASHC2DQ5SRD0 308 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 MTDHQ86UE4 582 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 CLEC4DQ8WXI8 215 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 NTPCRQ9BSD7 190 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 NPHS2Q9NP85 383 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 NMRK1Q9NWW6 199 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 FEM1BQ9UK73 627 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 C2CD2LO14523 706 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 ICAM1P05362 532 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 ATF7P17544 494 aaPredicted RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 ACO1P21399 889 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 RPL7AP62424 266 aaKnown RBP14.18□□□□□ -0.14
SKA3-202ENST00000314759 CTC1Q2NKJ3 1217 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 WDR72Q3MJ13 1102 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 MFSD7Q6UXD7 560 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 FAM136AQ96C01 138 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 SLITRK1Q96PX8 696 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 ZFP69BQ9UJL9 534 aa14.18□□□□□ -0.14
SKA3-202ENST00000314759 A0A1B0GVG6 124 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 ACADSP16219 412 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 PTPN4P29074 926 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 WNT7BP56706 349 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 ROR2Q01974 943 aaKnown RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 PDIA2Q13087 525 aaKnown RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 LBRQ14739 615 aaKnown RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 MORF4L2Q15014 288 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 MUM1Q2TAK8 710 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 SPDYAQ5MJ70 313 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 ZFYVE27Q5T4F4 411 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 RNASEH2BQ5TBB1 312 aaKnown RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 DRICH1Q6PGQ1 229 aaPredicted RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 CLNKQ7Z7G1 428 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 NLRX1Q86UT6 975 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 RCOR2Q8IZ40 523 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 ABRAQ8N0Z2 381 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 MIPEPQ99797 713 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 TLE6Q9H808 572 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 ANKEF1Q9NU02 776 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 NFASCO94856 1347 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 PIAS1O75925 651 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 HLA-DRAP01903 254 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 PTGER2P43116 358 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 GPX6P59796 221 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 BRDTQ58F21 947 aaPredicted RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 WDR44Q5JSH3 913 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 FOXB2Q5VYV0 432 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 OR52E8Q6IFG1 317 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 APBB1IPQ7Z5R6 666 aaPredicted RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 ANKMY2Q8IV38 441 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 MFN1Q8IWA4 741 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 GALNT15Q8N3T1 639 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 NRG4Q8WWG1 115 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 MASTLQ96GX5 879 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 VCPIP1Q96JH7 1222 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 METTL5Q9NRN9 209 aaKnown RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 KANSL3Q9P2N6 904 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 PSMC3IPQ9P2W1 217 aaPredicted RBP14.17□□□□□ -0.14
SKA3-202ENST00000314759 SLC24A2Q9UI40 661 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 IVNS1ABPQ9Y6Y0 642 aa14.17□□□□□ -0.14
SKA3-202ENST00000314759 SIGLEC16A6NMB1 481 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms