RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 SCARA5Q6ZMJ2 495 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 ENOSF1Q7L5Y1 443 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 ADGRF2Q8IZF7 708 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 PPM1KQ8N3J5 372 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 LNX1Q8TBB1 728 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 JAKMIP2Q96AA8 810 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 RTP3Q9BQQ7 232 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 LMAN2LQ9H0V9 348 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 TTYH1Q9H313 450 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 PUF60Q9UHX1 559 aaKnown RBP13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 NME7Q9Y5B8 376 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 ITIH6Q6UXX5 1313 aa13.54□□□□□ -0.24
CHMP2A-201ENST00000312547 LHX1P48742 406 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 GLUD2P49448 558 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 ERVFC1P60507 584 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 PLCB2Q00722 1185 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 PTPN14Q15678 1187 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 FIGNQ5HY92 759 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 OVOS1Q6IE37 1185 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 WHAMMQ8TF30 809 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 TTYH3Q9C0H2 523 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 RXFP1Q9HBX9 757 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 CISHQ9NSE2 258 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 FAM207AQ9NSI2 230 aaPredicted RBP13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 DNAJC12Q9UKB3 198 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 BARX2Q9UMQ3 279 aaPredicted RBP13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 CNTN6Q9UQ52 1028 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 BACE2Q9Y5Z0 518 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 FHOD1Q9Y613 1164 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 IRAK3Q9Y616 596 aa13.53□□□□□ -0.24
CHMP2A-201ENST00000312547 CILPO75339 1184 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 CLSTN1O94985 981 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 URODP06132 367 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 MFAP3P55082 362 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 YWHAHQ04917 246 aaPredicted RBP13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 PDXDC1Q6P996 788 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 PRSS55Q6UWB4 352 aaPredicted RBP13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 ANKS3Q6ZW76 656 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 Q7L0L9 218 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 METTL23Q86XA0 190 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 CEP57Q86XR8 500 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 TTC39CQ8N584 583 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 NEK11Q8NG66 645 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 GDPD5Q8WTR4 605 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 RIN2Q8WYP3 895 aaPredicted RBP13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 SHC3Q92529 594 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 PCMTD1Q96MG8 357 aaPredicted RBP13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 GPR88Q9GZN0 384 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 NGRNQ9NPE2 291 aaKnown RBP13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 TLR9Q9NR96 1032 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 SSX2IPQ9Y2D8 614 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 STXBP5LQ9Y2K9 1186 aa13.52□□□□□ -0.25
CHMP2A-201ENST00000312547 H7C4K7 107 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 RFXAPO00287 272 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 HCRTO43612 131 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 LMO2P25791 158 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 IRS1P35568 1242 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 GNL1P36915 607 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 ZNF132P52740 706 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 NDST1P52848 882 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 JAM2P57087 298 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 POLR2FP61218 127 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 YWHAEP62258 255 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 GSE1Q14687 1217 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 PSMD5Q16401 504 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 SPECC1LQ69YQ0 1117 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 SLC8B1Q6J4K2 584 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 PDE12Q6L8Q7 609 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 ZNF280DQ6N043 979 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 KIAA1841Q6NSI8 718 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 GPR153Q6NV75 609 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 RSPO2Q6UXX9 243 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 UNC93AQ86WB7 457 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 MRPL43Q8N983 215 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 OR6B3Q8NGW1 331 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 OR10T2Q8NGX3 314 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 AUTS2Q8WXX7 1259 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 TWNKQ96RR1 684 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 PKMYT1Q99640 499 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 STK33Q9BYT3 514 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 EDEM3Q9BZQ6 932 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms