RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PRELID2Q8N945 189 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 CFAP36Q96G28 342 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 ZSWIM1Q9BR11 485 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 MAK16Q9BXY0 300 aaKnown RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 TRIM55Q9BYV6 548 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 NAALADL1Q9UQQ1 740 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 R3HDM2Q9Y2K5 976 aaKnown RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 ZNF536O15090 1300 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 RTN2O75298 545 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 DNAJC8O75937 253 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 TCF4P15884 667 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 MAN1A1P33908 653 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 RGS7P49802 495 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 ARSEP51690 589 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 ARFIP2P53365 341 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 THOC5Q13769 683 aaKnown RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 TAF1BQ53T94 588 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 POTEAQ6S8J7 498 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 MOXD1Q6UVY6 613 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 RMDN2Q96LZ7 410 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 E2F8A0AVK6 867 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 KLRG2A4D1S0 409 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 GTF2H1P32780 548 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 RPL7AP62424 266 aaKnown RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 TMPRSS15P98073 1019 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 KRT76Q01546 638 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 ITIH4Q14624 930 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 FAXCQ5TGI0 409 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 MYLK2Q9H1R3 596 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 C12orf65Q9H3J6 166 aaKnown RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 KIAA0391O15091 583 aaKnown RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 DDNO94850 711 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-201ENST00000309428 LCA5LO95447 670 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 RARGP13631 454 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 CHKAP35790 457 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 PGM1P36871 562 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 NT5C2P49902 561 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 FMO1Q01740 532 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 DEUP1Q05D60 604 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 TMEM63BQ5T3F8 832 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 SPATA24Q86W54 205 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 FITM2Q8N6M3 262 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 TMEM161BQ8NDZ6 487 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 THTPAQ9BU02 230 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 ARMCX1Q9P291 453 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 TXNDC16Q9P2K2 825 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 SCN7AQ01118 1682 aa13.34□□□□□ -0.27
RETREG3-201ENST00000309428 ADM5C9JUS6 153 aa13.33□□□□□ -0.27
RETREG3-201ENST00000309428 RGS9BPQ6ZS82 235 aa13.33□□□□□ -0.27
RETREG3-201ENST00000309428 H3BRJ5 948 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 CFLARO15519 480 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 BACE1P56817 501 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 FBXO16Q8IX29 292 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-201ENST00000309428 RBBP8NLQ8NC74 664 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-201ENST00000309428 ASAP3Q8TDY4 903 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 SLC26A7Q8TE54 656 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 FIZ1Q96SL8 496 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 RHBDL2Q9NX52 303 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 KRT4P19013 534 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 PAPOLAP51003 745 aaKnown RBP13.33□□□□□ -0.28
RETREG3-201ENST00000309428 UBA3Q8TBC4 463 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 PPP1R36Q96LQ0 422 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 PIH1D1Q9NWS0 290 aaKnown RBP13.33□□□□□ -0.28
RETREG3-201ENST00000309428 CNTNAP1P78357 1384 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 PFASO15067 1338 aa13.33□□□□□ -0.28
RETREG3-201ENST00000309428 ASAP2O43150 1006 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 GHRP10912 638 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 NCF2P19878 526 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-201ENST00000309428 MAGEA4P43358 317 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 NOVP48745 357 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 ALDH18A1P54886 795 aaKnown RBP13.32□□□□□ -0.28
RETREG3-201ENST00000309428 JAM2P57087 298 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 MYL6P60660 151 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 NCOA4Q13772 614 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 GLRA4Q5JXX5 417 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 MIS18BP1Q6P0N0 1132 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 ZNF662Q6ZS27 426 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 NLRP9Q7RTR0 991 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 PPM1NQ8N819 430 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 PRPF31Q8WWY3 499 aaKnown RBP13.32□□□□□ -0.28
RETREG3-201ENST00000309428 VCX3BQ9H321 246 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 IFT122Q9HBG6 1241 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 HEY2Q9UBP5 337 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 CSADQ9Y600 493 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 PRRC2BQ5JSZ5 2229 aaKnown RBP13.32□□□□□ -0.28
RETREG3-201ENST00000309428 PLSCR1O15162 318 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
RETREG3-201ENST00000309428 SP2Q02086 613 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 PPP6R3Q5H9R7 873 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-201ENST00000309428 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
RETREG3-201ENST00000309428 DNAJC24Q6P3W2 148 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms