RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 NBPF12Q5TAG4 269 aaPredicted RBP15.38■□□□□ 0.05
PTPN9-201ENST00000306726 C1orf228Q6PIY5 440 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 RASGEF1CQ8N431 466 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.38■□□□□ 0.05
PTPN9-201ENST00000306726 TXLNGQ9NUQ3 528 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 DOCK1Q14185 1865 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 SLC16A3O15427 465 aaKnown RBP15.38■□□□□ 0.05
PTPN9-201ENST00000306726 TOM1L1O75674 476 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 MT-ND3P03897 115 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 BRD2P25440 801 aaKnown RBP15.38■□□□□ 0.05
PTPN9-201ENST00000306726 SREBF1P36956 1147 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 SPIRE1Q08AE8 756 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 SLC1A5Q15758 541 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 AP1ARQ63HQ0 302 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 ZCCHC23Q6ZST2 131 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 LENG9Q96B70 501 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 CLPTM1LQ96KA5 538 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 RMDN3Q96TC7 470 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 TBC1D10AQ9BXI6 508 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 MYH4Q9Y623 1939 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 H3BRJ5 948 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 MGRN1O60291 552 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 ATP9AO75110 1047 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 ETS2P15036 469 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 PLCB4Q15147 1175 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 RNF220Q5VTB9 566 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 NLRP9Q7RTR0 991 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 TEX2Q8IWB9 1127 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 TAAR1Q96RJ0 339 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 ZNF395Q9H8N7 513 aaPredicted RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 MEI4A8MW99 385 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 CAPN9O14815 690 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 ASAP2O43150 1006 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 DNAJC8O75937 253 aaPredicted RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 KRT36O76013 467 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 QARSP47897 775 aaKnown RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 THOC5Q13769 683 aaKnown RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 MFSD7Q6UXD7 560 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 ANKRD13AQ8IZ07 590 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 TRAIPQ9BWF2 469 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 GPBP1L1Q9HC44 474 aaPredicted RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 GTF3C4Q9UKN8 822 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 MRPL11Q9Y3B7 192 aaKnown RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 CFAP73A6NFT4 308 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 GNAT1P11488 350 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 IGBP1P78318 339 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 PPP6R3Q5H9R7 873 aaPredicted RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 MIS18BP1Q6P0N0 1132 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 TTC7BQ86TV6 843 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 C1orf131Q8NDD1 294 aaKnown RBP15.37■□□□□ 0.05
PTPN9-201ENST00000306726 LPAR1Q92633 364 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 USP6NLQ92738 828 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 VAV3Q9UKW4 847 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 TELO2Q9Y4R8 837 aa15.37■□□□□ 0.05
PTPN9-201ENST00000306726 CYP3A7-CYP3A51PA0A087WV96 503 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 AVILO75366 819 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 DNAJC24Q6P3W2 148 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 HACE1Q8IYU2 909 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 FAM71DQ8N9W8 422 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 GRK7Q8WTQ7 553 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 UCMAQ8WVF2 138 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 KLRG1Q96E93 195 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 HSD17B14Q9BPX1 270 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 THTPAQ9BU02 230 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 MECRQ9BV79 373 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 PIDD1Q9HB75 910 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 INPP5FQ9Y2H2 1132 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 ASTN2O75129 1339 aaPredicted RBP15.36■□□□□ 0.05
PTPN9-201ENST00000306726 C19orf81C9J6K1 198 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 CCND1P24385 295 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 POLGP54098 1239 aaPredicted RBP15.36■□□□□ 0.05
PTPN9-201ENST00000306726 TRPC3Q13507 836 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 POU5F2Q8N7G0 328 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 CCDC110Q8TBZ0 833 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 CFAP57Q96MR6 1250 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 WRNIP1Q96S55 665 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 MAK16Q9BXY0 300 aaKnown RBP15.36■□□□□ 0.05
PTPN9-201ENST00000306726 IVNS1ABPQ9Y6Y0 642 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 INHBAP08476 426 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 ITGB5P18084 799 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 SERPINB3P29508 390 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 CLK2P49760 499 aaKnown RBP15.36■□□□□ 0.05
PTPN9-201ENST00000306726 WDR4P57081 412 aaKnown RBP15.36■□□□□ 0.05
PTPN9-201ENST00000306726 TMPRSS15P98073 1019 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 CRYMQ14894 314 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 SLFN11Q7Z7L1 901 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 CHURC1Q8WUH1 139 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 TARS2Q9BW92 718 aaKnown RBP15.36■□□□□ 0.05
PTPN9-201ENST00000306726 TTLL3Q9Y4R7 772 aa15.36■□□□□ 0.05
PTPN9-201ENST00000306726 FAM155BO75949 473 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 BGNP21810 368 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 KPNB1Q14974 876 aaKnown RBP15.35■□□□□ 0.05
PTPN9-201ENST00000306726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.35■□□□□ 0.05
PTPN9-201ENST00000306726 GMCL1Q96IK5 515 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 GBP5Q96PP8 586 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 TMEM206Q9H813 350 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 SLC17A7Q9P2U7 560 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 HAUS5O94927 633 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms