RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ZNF518BQ9C0D4 1074 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 PCDHGC3Q9UN70 934 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 CEP83Q9Y592 693 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 PCDHGC5Q9Y5F6 944 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 NCANO14594 1321 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 INPPL1O15357 1258 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 HUS1O60921 280 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 VDRP11473 427 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 GPNMBQ14956 572 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 SOWAHAQ2M3V2 549 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 NAA35Q5VZE5 725 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 GLB1LQ6UWU2 654 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 UNC93AQ86WB7 457 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 CPA5Q8WXQ8 436 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 DDX27Q96GQ7 796 aaKnown RBP18.66■□□□□ 0.58
KRT28-201ENST00000306658 HEXIM2Q96MH2 286 aaKnown RBP18.66■□□□□ 0.58
KRT28-201ENST00000306658 TMEM106CQ9BVX2 250 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 ELOVL4Q9GZR5 314 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 C11orf49Q9H6J7 331 aa18.66■□□□□ 0.58
KRT28-201ENST00000306658 SPTLC1O15269 473 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 POMCP01189 267 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 FAM163BP0C2L3 166 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 MYBL1P10243 752 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 NOMO3P69849 1222 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 TCEAL1Q15170 157 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 PASD1Q8IV76 773 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 TOP6BLQ8N6T0 577 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 TMEM35BQ8NCS4 154 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 LINC01599Q8WXQ3 324 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 TFAP2BQ92481 460 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 VCPIP1Q96JH7 1222 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 TWNKQ96RR1 684 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 MRPL45Q9BRJ2 306 aaKnown RBP18.65■□□□□ 0.58
KRT28-201ENST00000306658 ELAC1Q9H777 363 aaKnown RBP18.65■□□□□ 0.58
KRT28-201ENST00000306658 L2HGDHQ9H9P8 463 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 GTF3C4Q9UKN8 822 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 ATP11BQ9Y2G3 1177 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 INPP5FQ9Y2H2 1132 aa18.65■□□□□ 0.58
KRT28-201ENST00000306658 KIAA0100Q14667 2235 aaKnown RBP18.64■□□□□ 0.57
KRT28-201ENST00000306658 PODXLO00592 558 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 ENPP3O14638 875 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 PALMO75781 387 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 CFHP08603 1231 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 CLCNKBP51801 687 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 SGO2Q562F6 1265 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 MCOLN2Q8IZK6 566 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 OR6B3Q8NGW1 331 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 ZNF653Q96CK0 615 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 ARHGEF26Q96DR7 871 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 PAWRQ96IZ0 340 aaKnown RBP18.64■□□□□ 0.57
KRT28-201ENST00000306658 UROC1Q96N76 676 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 ZSWIM1Q9BR11 485 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 PPP1R12CQ9BZL4 782 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 LHX5Q9H2C1 402 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 TMEM161AQ9NX61 479 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 CTTNBP2NLQ9P2B4 639 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 KANSL3Q9P2N6 904 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 HMGXB4Q9UGU5 601 aa18.64■□□□□ 0.57
KRT28-201ENST00000306658 FAM170AA1A519 330 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 ENC1O14682 589 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 RIOK3O14730 519 aaKnown RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 CYP1A2P05177 515 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 PAX3P23760 479 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 GNL1P36915 607 aaPredicted RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 HADHBP55084 474 aaKnown RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 CCL23P55773 120 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 TUSC3Q13454 348 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 STILQ15468 1287 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 UPP1Q16831 310 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 LIMS2Q7Z4I7 341 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 PHF13Q86YI8 300 aaPredicted RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 SYCE1Q8N0S2 351 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 TPCN2Q8NHX9 752 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 URGCPQ8TCY9 931 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 SCLYQ96I15 445 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 SNX25Q9H3E2 840 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 TMEM39AQ9NV64 488 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 TDRD15B5MCY1 1934 aaKnown RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 GRID2IPA4D2P6 1211 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 A8MXQ7 604 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 CYB561D2O14569 222 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 CXCL10P02778 98 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 SSTR3P32745 418 aaPredicted RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 CDH5P33151 784 aaPredicted RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 ORC1Q13415 861 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 CNGA2Q16280 664 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 LIN9Q5TKA1 542 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 PAPD7Q5XG87 772 aaKnown RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 WNT8AQ9H1J5 351 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 OSGEPQ9NPF4 335 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 ADAM22Q9P0K1 906 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 UVRAGQ9P2Y5 699 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 CNOT8Q9UFF9 292 aaKnown RBP18.63■□□□□ 0.57
KRT28-201ENST00000306658 PCDHB7Q9Y5E2 793 aa18.63■□□□□ 0.57
KRT28-201ENST00000306658 CASTOR2A6NHX0 329 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 ATP1A1P05023 1023 aaKnown RBP18.62■□□□□ 0.57
KRT28-201ENST00000306658 CLTBP09497 229 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 CYP2C18P33260 490 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms