RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CPLX3Q8WVH0 158 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 SHC3Q92529 594 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 FAM81BQ96LP2 452 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 TTPALQ9BTX7 342 aa29.01■■■□□ 2.23
HDAC3-201ENST00000305264 C11orf84Q9BUA3 381 aaPredicted RBP29.01■■■□□ 2.23
HDAC3-201ENST00000305264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.01■■■□□ 2.23
HDAC3-201ENST00000305264 ARHGEF37A1IGU5 675 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 RB1P06400 928 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 WARSP23381 471 aaKnown RBP29■■■□□ 2.23
HDAC3-201ENST00000305264 JAM2P57087 298 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 USP41Q3LFD5 358 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 VARS2Q5ST30 1063 aaKnown RBP29■■■□□ 2.23
HDAC3-201ENST00000305264 OVOS1Q6IE37 1185 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 FBXO22Q8NEZ5 403 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 BAP1Q92560 729 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 STK33Q9BYT3 514 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 CHST7Q9NS84 486 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 DAAM1Q9Y4D1 1078 aa29■■■□□ 2.23
HDAC3-201ENST00000305264 F8VZ95 297 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 GABRDO14764 452 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 FXR1P51114 621 aaKnown RBP eCLIP28.99■■■□□ 2.23
HDAC3-201ENST00000305264 YWHAHQ04917 246 aaPredicted RBP28.99■■■□□ 2.23
HDAC3-201ENST00000305264 OR6B3Q8NGW1 331 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 ARNTL2Q8WYA1 636 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 TWNKQ96RR1 684 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 RTP3Q9BQQ7 232 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 COL4A4P53420 1690 aaPredicted RBP28.99■■■□□ 2.23
HDAC3-201ENST00000305264 CILPO75339 1184 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 LMO2P25791 158 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 CASP14P31944 242 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 NDST1P52848 882 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 ORC1Q13415 861 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 METTL23Q86XA0 190 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 GPIHBP1Q8IV16 184 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 SPPL3Q8TCT6 385 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 WHAMMQ8TF30 809 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 JAKMIP2Q96AA8 810 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 SPAG5Q96R06 1193 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 SNX25Q9H3E2 840 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 BARX2Q9UMQ3 279 aaPredicted RBP28.99■■■□□ 2.23
HDAC3-201ENST00000305264 PCDHB4Q9Y5E5 795 aa28.99■■■□□ 2.23
HDAC3-201ENST00000305264 FOXN3O00409 490 aaPredicted RBP28.98■■■□□ 2.23
HDAC3-201ENST00000305264 DNAJB1P25685 340 aa28.98■■■□□ 2.23
HDAC3-201ENST00000305264 TBX2Q13207 712 aaPredicted RBP28.98■■■□□ 2.23
HDAC3-201ENST00000305264 ZNF394Q53GI3 561 aa28.98■■■□□ 2.23
HDAC3-201ENST00000305264 TMEM270Q6UE05 265 aa28.98■■■□□ 2.23
HDAC3-201ENST00000305264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.98■■■□□ 2.23
HDAC3-201ENST00000305264 DRC7Q8IY82 874 aa28.98■■■□□ 2.23
HDAC3-201ENST00000305264 ZBP1Q9H171 429 aa28.98■■■□□ 2.23
HDAC3-201ENST00000305264 DDX43Q9NXZ2 648 aaKnown RBP28.98■■■□□ 2.23
HDAC3-201ENST00000305264 A0A1W2PQJ5 194 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 EPOPA6NHQ4 379 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 GRM6O15303 877 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 CSPG5O95196 566 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 GNL1P36915 607 aaPredicted RBP28.97■■■□□ 2.23
HDAC3-201ENST00000305264 GLUD2P49448 558 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 YWHAEP62258 255 aaKnown RBP28.97■■■□□ 2.23
HDAC3-201ENST00000305264 TRIM14Q14142 442 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 PRSS55Q6UWB4 352 aaPredicted RBP28.97■■■□□ 2.23
HDAC3-201ENST00000305264 SPC24Q8NBT2 197 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 AUTS2Q8WXX7 1259 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 RIN2Q8WYP3 895 aaPredicted RBP28.97■■■□□ 2.23
HDAC3-201ENST00000305264 CAPN11Q9UMQ6 739 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 LZTS1Q9Y250 596 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 STXBP5LQ9Y2K9 1186 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 C2CD2LO14523 706 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 OAZ2O95190 189 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 ACAT1P24752 427 aaKnown RBP28.97■■■□□ 2.23
HDAC3-201ENST00000305264 GOLGA8FQ08AF8 430 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 GOLGA8DPQ0D2H9 430 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 MRPL58Q14197 206 aaKnown RBP28.97■■■□□ 2.23
HDAC3-201ENST00000305264 KIAA1841Q6NSI8 718 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 SPATA18Q8TC71 538 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 POF1BQ8WVV4 589 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 IQCDQ96DY2 449 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 DPEP3Q9H4B8 488 aa28.97■■■□□ 2.23
HDAC3-201ENST00000305264 A8MXQ7 604 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 H3BNC9 293 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 PDGFRBP09619 1106 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 FAM163BP0C2L3 166 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 KRT5P13647 590 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 USP8P40818 1118 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 LHX1P48742 406 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 DSG1Q02413 1049 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 PPFIBP1Q86W92 1011 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 OR10T2Q8NGX3 314 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 EDEM3Q9BZQ6 932 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 ELOVL4Q9GZR5 314 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 FAM124BQ9H5Z6 455 aaPredicted RBP28.96■■■□□ 2.23
HDAC3-201ENST00000305264 PUF60Q9UHX1 559 aaKnown RBP28.96■■■□□ 2.23
HDAC3-201ENST00000305264 ATG2AQ2TAZ0 1938 aa28.96■■■□□ 2.23
HDAC3-201ENST00000305264 LRRC53A6NM62 1247 aa28.95■■■□□ 2.23
HDAC3-201ENST00000305264 URODP06132 367 aa28.95■■■□□ 2.23
HDAC3-201ENST00000305264 GPM6BQ13491 265 aa28.95■■■□□ 2.23
HDAC3-201ENST00000305264 KIAA0319Q5VV43 1072 aa28.95■■■□□ 2.23
HDAC3-201ENST00000305264 RBBP8NLQ8NC74 664 aaPredicted RBP28.95■■■□□ 2.23
HDAC3-201ENST00000305264 LNX1Q8TBB1 728 aaPredicted RBP28.95■■■□□ 2.23
HDAC3-201ENST00000305264 GDPD5Q8WTR4 605 aa28.95■■■□□ 2.23
HDAC3-201ENST00000305264 PIK3R5Q8WYR1 880 aa28.95■■■□□ 2.23
HDAC3-201ENST00000305264 STK39Q9UEW8 545 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms