RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 FIGNQ5HY92 759 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 E4F1Q66K89 784 aaPredicted RBP16.19■□□□□ 0.18
CCDC140-201ENST00000295226 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 LIMS2Q7Z4I7 341 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 UBR7Q8N806 425 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 OR6B3Q8NGW1 331 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 TWNKQ96RR1 684 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 AAASQ9NRG9 546 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 LUC7L2Q9Y383 392 aaKnown RBP16.19■□□□□ 0.18
CCDC140-201ENST00000295226 VWA8A3KMH1 1905 aa16.19■□□□□ 0.18
CCDC140-201ENST00000295226 F8VZ95 297 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 FGF18O76093 207 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 GFPT2O94808 682 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 ODC1P11926 461 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 ACAT1P24752 427 aaKnown RBP16.18■□□□□ 0.18
CCDC140-201ENST00000295226 KRT9P35527 623 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 NDST1P52848 882 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 TAP1Q03518 808 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 PDXDC1Q6P996 788 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 TOP6BLQ8N6T0 577 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 WHAMMQ8TF30 809 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 SHC3Q92529 594 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 TMEM169Q96HH4 297 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 CYP3A43Q9HB55 503 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 ALG13Q9NP73 1137 aaKnown RBP16.18■□□□□ 0.18
CCDC140-201ENST00000295226 FBXL5Q9UKA1 691 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 PYCARDQ9ULZ3 195 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 PCDHB8Q9UN66 801 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
CCDC140-201ENST00000295226 NLRC5Q86WI3 1866 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 SF3B1O75533 1304 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC140-201ENST00000295226 CYP26A1O43174 497 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 TRAPPC3O43617 180 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 EFEMP2O95967 443 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 GNL1P36915 607 aaPredicted RBP16.18■□□□□ 0.18
CCDC140-201ENST00000295226 CCDC142Q17RM4 750 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 RTP2Q5QGT7 225 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 ELOVL4Q9GZR5 314 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 SNX25Q9H3E2 840 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 DPEP3Q9H4B8 488 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 MSRAQ9UJ68 235 aa16.18■□□□□ 0.18
CCDC140-201ENST00000295226 A0A1W2PQJ5 194 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 AKR1B15C9JRZ8 316 aaPredicted RBP16.17■□□□□ 0.18
CCDC140-201ENST00000295226 C2CD2LO14523 706 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 MFAP3LO75121 409 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 ATP2C2O75185 946 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 TACC1O75410 805 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 SSTR3P32745 418 aaPredicted RBP16.17■□□□□ 0.18
CCDC140-201ENST00000295226 SOX5P35711 763 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 ZBED6P86452 979 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 TRIM14Q14142 442 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 KIAA0319Q5VV43 1072 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 PRSS55Q6UWB4 352 aaPredicted RBP16.17■□□□□ 0.18
CCDC140-201ENST00000295226 ENOSF1Q7L5Y1 443 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 TC2NQ8N9U0 490 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 AUTS2Q8WXX7 1259 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 TMEM209Q96SK2 561 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 RTP3Q9BQQ7 232 aa16.17■□□□□ 0.18
CCDC140-201ENST00000295226 DDX43Q9NXZ2 648 aaKnown RBP16.17■□□□□ 0.18
CCDC140-201ENST00000295226 MYO9BQ13459 2157 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 TRIOBPQ9H2D6 2365 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 A8MXQ7 604 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 GABRDO14764 452 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 CILPO75339 1184 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 CYP11A1P05108 521 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 TPM1P09493 284 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 SKILP12757 684 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 FGFR3P22607 806 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 RFX1P22670 979 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 WARSP23381 471 aaKnown RBP16.16■□□□□ 0.18
CCDC140-201ENST00000295226 DNAJB2P25686 324 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 STAT1P42224 750 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 RAD23BP54727 409 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 PSMC1P62191 440 aaKnown RBP16.16■□□□□ 0.18
CCDC140-201ENST00000295226 VARS2Q5ST30 1063 aaKnown RBP16.16■□□□□ 0.18
CCDC140-201ENST00000295226 OVOS1Q6IE37 1185 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 ACOT1Q86TX2 421 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 METTL23Q86XA0 190 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 VPS52Q8N1B4 723 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 RBBP8NLQ8NC74 664 aaPredicted RBP16.16■□□□□ 0.18
CCDC140-201ENST00000295226 ZNF397Q8NF99 534 aaPredicted RBP16.16■□□□□ 0.18
CCDC140-201ENST00000295226 EDEM3Q9BZQ6 932 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 KCND1Q9NSA2 647 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 BARX2Q9UMQ3 279 aaPredicted RBP16.16■□□□□ 0.18
CCDC140-201ENST00000295226 PLXNA4Q9HCM2 1894 aa16.16■□□□□ 0.18
CCDC140-201ENST00000295226 FAM170AA1A519 330 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 DNAJB1P25685 340 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 PPM1AP35813 382 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 KRT17Q04695 432 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 YWHAHQ04917 246 aaPredicted RBP16.15■□□□□ 0.18
CCDC140-201ENST00000295226 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 SFMBT2Q5VUG0 894 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 PPP2R2DQ66LE6 453 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 DDX53Q86TM3 631 aaKnown RBP16.15■□□□□ 0.18
CCDC140-201ENST00000295226 SLC47A2Q86VL8 602 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 RNF168Q8IYW5 571 aaPredicted RBP16.15■□□□□ 0.18
CCDC140-201ENST00000295226 TMEM86AQ8N2M4 240 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 SLC4A11Q8NBS3 891 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms