RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SPDYCQ5MJ68 293 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 GDF6Q6KF10 455 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-201ENST00000292476 C11orf63Q6NUN7 778 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 KLHL7Q8IXQ5 586 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 SLC35G2Q8TBE7 412 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 KREMEN1Q96MU8 473 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 MTMR12Q9C0I1 747 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 FAM107BQ9H098 131 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 FAM153AQ9UHL3 310 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 ZSCAN5CA6NGD5 496 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 SRRM3A6NNA2 597 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 LACTBL1A8MY62 500 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 MIF4GDA9UHW6 222 aaKnown RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 HMGB1P1B2RPK0 211 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 EIF3HO15372 352 aaKnown RBP eCLIP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 BUB1BO60566 1050 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 CAND2O75155 1236 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 ASS1P00966 412 aaKnown RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 ATICP31939 592 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 PDE6CP51160 858 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 IRAK1P51617 712 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 YWHAEP62258 255 aaKnown RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 NOP14P78316 857 aaKnown RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 CUL2Q13617 745 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 KDM7AQ6ZMT4 941 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 CEP120Q8N960 986 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 PIK3R5Q8WYR1 880 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 TATDN2Q93075 761 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 AGPAT1Q99943 283 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 HINFPQ9BQA5 517 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 CDHR5Q9HBB8 845 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 CHST12Q9NRB3 414 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 FAM114A2Q9NRY5 505 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 PHF24Q9UPV7 400 aa17.88■□□□□ 0.45
CPSF4-201ENST00000292476 RRP15Q9Y3B9 282 aaKnown RBP17.88■□□□□ 0.45
CPSF4-201ENST00000292476 A0A1W2PQ45 241 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-201ENST00000292476 A0A1W2PQY0 241 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 ESYT3A0FGR9 886 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 DDX3YO15523 660 aaKnown RBP17.87■□□□□ 0.45
CPSF4-201ENST00000292476 NPTXRO95502 500 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 ECHS1P30084 290 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 PTK7Q13308 1070 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 ITGA7Q13683 1181 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 TMEM132DQ14C87 1099 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 PTGISQ16647 500 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 ZNF677Q86XU0 584 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 C7orf61Q8IZ16 206 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 PI4K2AQ9BTU6 479 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 FAM124BQ9H5Z6 455 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-201ENST00000292476 PIN4Q9Y237 131 aaKnown RBP17.87■□□□□ 0.45
CPSF4-201ENST00000292476 NOD1Q9Y239 953 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 MTA2O94776 668 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 P4HA1P13674 534 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 FGFR4P22455 802 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 SLC10A6Q3KNW5 377 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 HACE1Q8IYU2 909 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 ARL8AQ96BM9 186 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.87■□□□□ 0.45
CPSF4-201ENST00000292476 ITGA11Q9UKX5 1188 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 PCDHB2Q9Y5E7 798 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 CDY2AQ9Y6F7 541 aa17.87■□□□□ 0.45
CPSF4-201ENST00000292476 GOLGA6L10A0A0M3HER8 536 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 GPR182O15218 404 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 GRIN2DO15399 1336 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 XPOTO43592 962 aaKnown RBP17.86■□□□□ 0.45
CPSF4-201ENST00000292476 GZMAP12544 262 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 KRT5P13647 590 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 ZNF699Q32M78 642 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 SLC39A5Q6ZMH5 540 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 EFCAB13Q8IY85 973 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 PPP1R13LQ8WUF5 828 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 NIF3L1Q9GZT8 377 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 RAB17Q9H0T7 212 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 GOLPH3Q9H4A6 298 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 PCDH10Q9P2E7 1040 aa17.86■□□□□ 0.45
CPSF4-201ENST00000292476 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-201ENST00000292476 FAM187AA6NFU0 413 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 GOLGA6L10A6NI86 522 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 CST3P01034 146 aaPredicted RBP17.85■□□□□ 0.45
CPSF4-201ENST00000292476 GUCY2FP51841 1108 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 RNASE9P60153 205 aaKnown RBP17.85■□□□□ 0.45
CPSF4-201ENST00000292476 HLTFQ14527 1009 aaKnown RBP eCLIP17.85■□□□□ 0.45
CPSF4-201ENST00000292476 DNAJC21Q5F1R6 531 aaKnown RBP17.85■□□□□ 0.45
CPSF4-201ENST00000292476 JADE1Q6IE81 842 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 PPP1R2P3Q6NXS1 205 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 TMEM192Q8IY95 271 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 TTC39CQ8N584 583 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 TMEM40Q8WWA1 233 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 KAT5Q92993 513 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 ATP6V1G3Q96LB4 118 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 RPS6KC1Q96S38 1066 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 STARD7Q9NQZ5 370 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 UTP11Q9Y3A2 253 aaKnown RBP17.85■□□□□ 0.45
CPSF4-201ENST00000292476 SQORQ9Y6N5 450 aa17.85■□□□□ 0.45
CPSF4-201ENST00000292476 H0YGN5 161 aa17.84■□□□□ 0.45
CPSF4-201ENST00000292476 MYO1CO00159 1063 aa17.84■□□□□ 0.45
CPSF4-201ENST00000292476 CYP26A1O43174 497 aa17.84■□□□□ 0.45
CPSF4-201ENST00000292476 RTN2O75298 545 aa17.84■□□□□ 0.45
CPSF4-201ENST00000292476 CYP11B1P15538 503 aa17.84■□□□□ 0.45
CPSF4-201ENST00000292476 MYL6P60660 151 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms