RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 VCPIP1Q96JH7 1222 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 POLR3FQ9H1D9 316 aaPredicted RBP13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 PARVAQ9NVD7 372 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 NFASCO94856 1347 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 ATP5HO75947 161 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 TJP3O95049 919 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 ENPEPQ07075 957 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 RGS9BPQ6ZS82 235 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 AGGF1Q8N302 714 aaeCLIP13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 FAXDC2Q96IV6 333 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 ARHGAP28Q9P2N2 729 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 IP6K2Q9UHH9 426 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 SCAF8Q9UPN6 1271 aaKnown RBP13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 IVNS1ABPQ9Y6Y0 642 aa13.98□□□□□ -0.17
SLC28A1-201ENST00000286749 ZNF541Q9H0D2 1346 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 GOLGA8SH3BPF8 625 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 GOLGA8MH3BSY2 632 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 WDR46O15213 610 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 DCTN3O75935 186 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 ZNF252P-AS1Q0IIN9 211 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 PDIA2Q13087 525 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 HHATQ5VTY9 493 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 SWSAP1Q6NVH7 229 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 ANKMY2Q8IV38 441 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 MCPH1Q8NEM0 835 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 C10orf82Q8WW14 230 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 AGO2Q9UKV8 859 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 DGAT1O75907 488 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 NEBLO76041 1014 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 FGFR1P11362 822 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 ALDH3A1P30838 453 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 SLC18A1P54219 525 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 MORF4L2Q15014 288 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 CCDC142Q17RM4 750 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 ZBTB41Q5SVQ8 909 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 RNASEH2BQ5TBB1 312 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 TXNRD3NBQ6F5E7 133 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 ATP6V0A1Q93050 837 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 TMEM121Q9BTD3 319 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 MAK16Q9BXY0 300 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 PDLIM7Q9NR12 457 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 SENP1Q9P0U3 644 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 NUB1Q9Y5A7 615 aa13.97□□□□□ -0.17
SLC28A1-201ENST00000286749 FER1L6Q2WGJ9 1857 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 F8VP50 259 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 ALOX15BO15296 676 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 TYROBPO43914 113 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 CBX6O95503 412 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 IFNB1P01574 187 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 T-ENOLP0DO92 83 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 WDR72Q3MJ13 1102 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 DRICH1Q6PGQ1 229 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 CENPUQ71F23 418 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 OTOAQ7RTW8 1153 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 LONP2Q86WA8 852 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 FAM13CQ8NE31 585 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 SLC7A6OSQ96CW6 309 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 ZBTB45Q96K62 511 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 MCEEQ96PE7 176 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 HAPLN2Q9GZV7 340 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 MAP3K20Q9NYL2 800 aaKnown RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 PSMC3IPQ9P2W1 217 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 TMEM191CA6NGB0 347 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 SGK1O00141 431 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 PEX11AO75192 247 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 PIAS1O75925 651 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 TMEM191BP0C7N4 346 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 CCNG1P51959 295 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 VCPP55072 806 aaKnown RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 PLCB3Q01970 1234 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 PRKCEQ02156 737 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■■□ 23.5
SLC28A1-201ENST00000286749 TAF11Q15544 211 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 LVRNQ6Q4G3 990 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 INPP5DQ92835 1189 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 TBC1D10AQ9BXI6 508 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 RNPEPL1Q9HAU8 725 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 CTDP1Q9Y5B0 961 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-201ENST00000286749 GM2AP17900 193 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 KRT4P19013 534 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 MMP8P22894 467 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 EPHB2P29323 1055 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 PSMC4P43686 418 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 PSEN1P49768 467 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 RTP1P59025 263 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 OGDHQ02218 1023 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 GAD2Q05329 585 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 OASLQ15646 514 aaKnown RBP13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 MTERF2Q49AM1 385 aa13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 CCDC60Q8IWA6 550 aaPredicted RBP13.95□□□□□ -0.18
SLC28A1-201ENST00000286749 ZNF606Q8WXB4 792 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms