RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ZNF268Q14587 947 aaPredicted RBP19.43■□□□□ 0.7
PDLIM3-201ENST00000284767 CDCA2Q69YH5 1023 aaPredicted RBP19.43■□□□□ 0.7
PDLIM3-201ENST00000284767 TRMT10CQ7L0Y3 403 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-201ENST00000284767 TCP11Q8WWU5 503 aa19.43■□□□□ 0.7
PDLIM3-201ENST00000284767 ACO2Q99798 780 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-201ENST00000284767 NMRK2Q9NPI5 230 aa19.43■□□□□ 0.7
PDLIM3-201ENST00000284767 PASKQ96RG2 1323 aa19.43■□□□□ 0.7
PDLIM3-201ENST00000284767 SSTR3P32745 418 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 MXD4Q14582 209 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 GBP7Q8N8V2 638 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 KCNN1Q92952 543 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 MRPL4Q9BYD3 311 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 C1orf112Q9NSG2 853 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 ERAP1Q9NZ08 941 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 HBP1O60381 514 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 MTA2O94776 668 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 C22orf31O95567 290 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 IBSPP21815 317 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 GCLCP48506 637 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 MAPK6Q16659 721 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 FAM133BQ5BKY9 247 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 THNSL1Q8IYQ7 743 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 NPLOC4Q8TAT6 608 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 GTF3C2Q8WUA4 911 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 SLC45A1Q9Y2W3 748 aa19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 USP15Q9Y4E8 981 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-201ENST00000284767 ABLIM1O14639 778 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 TOM1L1O75674 476 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 GH1P01241 217 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 CLTAP09496 248 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 COILP38432 576 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 IFNAR2P48551 515 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 SLC8A3P57103 927 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 EEF1DP3Q658K8 133 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 TBC1D1Q86TI0 1168 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 ZDHHC14Q8IZN3 488 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 DDX1Q92499 740 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 RSRC1Q96IZ7 334 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 MAML3Q96JK9 1138 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 ABCF3Q9NUQ8 709 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 DOCK3Q8IZD9 2030 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 CST3P01034 146 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 ALADP13716 330 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 SMPD1P17405 629 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 GBP2P32456 591 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 SLCO1A2P46721 670 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 MARCKSL1P49006 195 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 EFNA5P52803 228 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 CLNS1AP54105 237 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 LAMC2Q13753 1193 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 PRAMEF19Q5SWL8 479 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 UBAP2Q5T6F2 1119 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 ZPBP2Q6X784 338 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 EXOC3L1Q86VI1 746 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 ZBTB8OSQ8IWT0 167 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 CCDC105Q8IYK2 499 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 C12orf50Q8NA57 414 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 TBC1D31Q96DN5 1066 aa19.41■□□□□ 0.7
PDLIM3-201ENST00000284767 LDHAP00338 332 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 NQO1P15559 274 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 COMTP21964 271 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 ATP5DP30049 168 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 GCNT1Q02742 428 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 ZNF568Q3ZCX4 644 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 C2CD6Q53TS8 623 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 CPNE8Q86YQ8 564 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 TMEM192Q8IY95 271 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 CD101Q93033 1021 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 CGRRF1Q99675 332 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 PLCD4Q9BRC7 762 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 VTA1Q9NP79 307 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 STRNO43815 780 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 RTN2O75298 545 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 SUN1O94901 812 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 VTNP04004 478 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 PSEN1P49768 467 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 HUNKP57058 714 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 GRB14Q14449 540 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 GALNTL6Q49A17 601 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 WDR44Q5JSH3 913 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 SLC13A5Q86YT5 568 aaPredicted RBP19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 UHMK1Q8TAS1 419 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 DYDC1Q8WWB3 177 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 BTBD6Q96KE9 485 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 SERPINB12Q96P63 405 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 PARK7Q99497 189 aaKnown RBP19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 C16orf70Q9BSU1 422 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 MTMR12Q9C0I1 747 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 AGAP1Q9UPQ3 857 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 NUB1Q9Y5A7 615 aa19.4■□□□□ 0.7
PDLIM3-201ENST00000284767 UNCXA6NJT0 531 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 TMEM110-MUSTN1A8MSY1 372 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 UBOX5O94941 541 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 CFHP08603 1231 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 RARAP10276 462 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 SLC26A2P50443 739 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 NCALDP61601 193 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 FKBP1BP68106 108 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 CDR2Q01850 454 aa19.39■□□□□ 0.7
PDLIM3-201ENST00000284767 CALCOCO2Q13137 446 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms