RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 C11orf63Q6NUN7 778 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 NT5DC3Q86UY8 548 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 FAM126BQ8IXS8 530 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 CAGE1Q8TC20 777 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 LPPQ93052 612 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 ZFP42Q96MM3 310 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 MMS19Q96T76 1030 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 ZNF518BQ9C0D4 1074 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 GOLPH3Q9H4A6 298 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 GDAP2Q9NXN4 497 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 FAM53CQ9NYF3 392 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 CNOT8Q9UFF9 292 aaKnown RBP15.46■□□□□ 0.07
TRIM23-202ENST00000274327 SNX9Q9Y5X1 595 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 ZNF185O15231 689 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 MED7O43513 233 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 KIF4AO95239 1232 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 MLH1P40692 756 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 NDST1P52848 882 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 NAA30Q147X3 362 aaPredicted RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 RSRC2Q7L4I2 434 aaKnown RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 LIMS2Q7Z4I7 341 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 DAAM2Q86T65 1068 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 CREG2Q8IUH2 290 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 KRT222Q8N1A0 295 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 ZNF564Q8TBZ8 553 aaPredicted RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 COG1Q8WTW3 980 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 GAD1Q99259 594 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 ADAM2Q99965 735 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 MRPL45Q9BRJ2 306 aaKnown RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 LHX5Q9H2C1 402 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 GOLGA2P5Q9HBQ8 144 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 SLC38A7Q9NVC3 462 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 MIOSQ9NXC5 875 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 PACSIN2Q9UNF0 486 aaPredicted RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 DNAH12Q6ZR08 3092 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 SPTLC1O15269 473 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 VDRP11473 427 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 SKIP12755 728 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 CD19P15391 556 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 TAF6P49848 677 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 CKAP4Q07065 602 aaKnown RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 RPS6KA1Q15418 735 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 PEX26Q7Z412 305 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 WDTC1Q8N5D0 677 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 TMEM35BQ8NCS4 154 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 HES6Q96HZ4 224 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 RNF208Q9H0X6 261 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 AMFRQ9UKV5 643 aa15.45■□□□□ 0.06
TRIM23-202ENST00000274327 TDRD15B5MCY1 1934 aaKnown RBP15.45■□□□□ 0.06
TRIM23-202ENST00000274327 ARL5CA6NH57 179 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 KPNA7A9QM74 516 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 CES2O00748 559 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 MMP8P22894 467 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 RRM1P23921 792 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 ORC1Q13415 861 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 SOWAHAQ2M3V2 549 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 SV2CQ496J9 727 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 DENND1BQ6P3S1 775 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 ZNF572Q7Z3I7 529 aaPredicted RBP15.44■□□□□ 0.06
TRIM23-202ENST00000274327 ZNF598Q86UK7 904 aaKnown RBP15.44■□□□□ 0.06
TRIM23-202ENST00000274327 C1orf131Q8NDD1 294 aaKnown RBP15.44■□□□□ 0.06
TRIM23-202ENST00000274327 PGBD4Q96DM1 585 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 CAPZA3Q96KX2 299 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 RPS6KC1Q96S38 1066 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 C11orf70Q9BRQ4 267 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 NT5C1AQ9BXI3 368 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 RGS18Q9NS28 235 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 ADAM22Q9P0K1 906 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRIM23-202ENST00000274327 CHORDC1Q9UHD1 332 aaPredicted RBP15.44■□□□□ 0.06
TRIM23-202ENST00000274327 KIAA1257Q9ULG3 409 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 NME7Q9Y5B8 376 aa15.44■□□□□ 0.06
TRIM23-202ENST00000274327 V9GYY5 206 aaPredicted RBP15.44■□□□□ 0.06
TRIM23-202ENST00000274327 CTAGE15A4D2H0 777 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 PDE2AO00408 941 aaPredicted RBP15.43■□□□□ 0.06
TRIM23-202ENST00000274327 THP07101 528 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 CTAGE8P0CG41 777 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 SELPP16109 830 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 AFF1P51825 1210 aaKnown RBP15.43■□□□□ 0.06
TRIM23-202ENST00000274327 CNGA2Q16280 664 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 LIN9Q5TKA1 542 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 LRRC8DQ7L1W4 858 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 CTAGE6Q86UF2 777 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 RTN4RL1Q86UN2 441 aaPredicted RBP15.43■□□□□ 0.06
TRIM23-202ENST00000274327 UNC93AQ86WB7 457 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 ECHDC2Q86YB7 292 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 CTAGE4Q8IX94 777 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 RSAD1Q9HA92 442 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.43■□□□□ 0.06
TRIM23-202ENST00000274327 O00370 1275 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 INPPL1O15357 1258 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 MYCP01106 439 aaPredicted RBP15.43■□□□□ 0.06
TRIM23-202ENST00000274327 CXCR5P32302 372 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
TRIM23-202ENST00000274327 SCNN1GP51170 649 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 LILRA4P59901 499 aa15.43■□□□□ 0.06
TRIM23-202ENST00000274327 BFSP2Q13515 415 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms