RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CAPN11Q9UMQ6 739 aa18.4■□□□□ 0.54
SKP2-201ENST00000274254 CNTN6Q9UQ52 1028 aa18.4■□□□□ 0.54
SKP2-201ENST00000274254 LZTS1Q9Y250 596 aa18.4■□□□□ 0.54
SKP2-201ENST00000274254 TIMM13Q9Y5L4 95 aaPredicted RBP18.4■□□□□ 0.54
SKP2-201ENST00000274254 PLXNA4Q9HCM2 1894 aa18.4■□□□□ 0.54
SKP2-201ENST00000274254 F8VZ95 297 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 RNF225M0QZC1 329 aaPredicted RBP18.39■□□□□ 0.54
SKP2-201ENST00000274254 OAZ2O95190 189 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 RAPGEF1Q13905 1077 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 MRPL58Q14197 206 aaKnown RBP18.39■□□□□ 0.54
SKP2-201ENST00000274254 ARHGAP44Q17R89 818 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 USP41Q3LFD5 358 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 TTC39CQ8N584 583 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 TIFAQ96CG3 184 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 C11orf84Q9BUA3 381 aaPredicted RBP18.39■□□□□ 0.54
SKP2-201ENST00000274254 HERC2P3Q9BVR0 1158 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 SLC28A3Q9HAS3 691 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 BARX2Q9UMQ3 279 aaPredicted RBP18.39■□□□□ 0.54
SKP2-201ENST00000274254 NME7Q9Y5B8 376 aa18.39■□□□□ 0.54
SKP2-201ENST00000274254 CILPO75339 1184 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 CD58P19256 250 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 LHX1P48742 406 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 FXR1P51114 621 aaKnown RBP eCLIP18.39■□□□□ 0.53
SKP2-201ENST00000274254 YWHAEP62258 255 aaKnown RBP18.39■□□□□ 0.53
SKP2-201ENST00000274254 YWHAHQ04917 246 aaPredicted RBP18.39■□□□□ 0.53
SKP2-201ENST00000274254 UBE3AQ05086 875 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 RTP2Q5QGT7 225 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 VARS2Q5ST30 1063 aaKnown RBP18.39■□□□□ 0.53
SKP2-201ENST00000274254 CACNA2D4Q7Z3S7 1137 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 OSTM1Q86WC4 334 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 METTL23Q86XA0 190 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 SPPL3Q8TCT6 385 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 WHAMMQ8TF30 809 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 B3GALT6Q96L58 329 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 TTPALQ9BTX7 342 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 MTUS1Q9ULD2 1270 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 MYO6Q9UM54 1294 aa18.39■□□□□ 0.53
SKP2-201ENST00000274254 FOXN3O00409 490 aaPredicted RBP18.38■□□□□ 0.53
SKP2-201ENST00000274254 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
SKP2-201ENST00000274254 DSG1Q02413 1049 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 OVOS1Q6IE37 1185 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 UNC93AQ86WB7 457 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 CEP57Q86XR8 500 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 GPR65Q8IYL9 337 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 FAM71AQ8IYT1 594 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 VPS52Q8N1B4 723 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 OR6B3Q8NGW1 331 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 SPAG5Q96R06 1193 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 RTP3Q9BQQ7 232 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 STXBP5LQ9Y2K9 1186 aa18.38■□□□□ 0.53
SKP2-201ENST00000274254 H3BNC9 293 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 LMO2P25791 158 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 CASP14P31944 242 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 ZNF132P52740 706 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 NDST1P52848 882 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 ZBED6P86452 979 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 KIAA0319Q5VV43 1072 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 ANKS3Q6ZW76 656 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 PPFIBP1Q86W92 1011 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 FBXO22Q8NEZ5 403 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 CPLX3Q8WVH0 158 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 PIK3R5Q8WYR1 880 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 TWNKQ96RR1 684 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 ZBP1Q9H171 429 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 SNX25Q9H3E2 840 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 ALG13Q9NP73 1137 aaKnown RBP18.37■□□□□ 0.53
SKP2-201ENST00000274254 DDX43Q9NXZ2 648 aaKnown RBP18.37■□□□□ 0.53
SKP2-201ENST00000274254 PUF60Q9UHX1 559 aaKnown RBP18.37■□□□□ 0.53
SKP2-201ENST00000274254 LUC7L2Q9Y383 392 aaKnown RBP18.37■□□□□ 0.53
SKP2-201ENST00000274254 PCDHB4Q9Y5E5 795 aa18.37■□□□□ 0.53
SKP2-201ENST00000274254 MYO9BQ13459 2157 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 HCRTO43612 131 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 TBC1D4O60343 1298 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
SKP2-201ENST00000274254 CTSAP10619 480 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 SOX5P35711 763 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 GLUD2P49448 558 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 PDXDC1Q6P996 788 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 TMEM270Q6UE05 265 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 DRC7Q8IY82 874 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 LNX1Q8TBB1 728 aaPredicted RBP18.36■□□□□ 0.53
SKP2-201ENST00000274254 NT5C1AQ9BXI3 368 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 ELOVL4Q9GZR5 314 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 IMPACTQ9P2X3 320 aa18.36■□□□□ 0.53
SKP2-201ENST00000274254 LRRC53A6NM62 1247 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 A8MXQ7 604 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 GRM6O15303 877 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 LILRB3O75022 631 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 MFAP3LO75121 409 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 URODP06132 367 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 DNAJB1P25685 340 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 STAT1P42224 750 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 RAD23BP54727 409 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 CAMK1Q14012 370 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 ARID5BQ14865 1188 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 KIAA1841Q6NSI8 718 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 CRYBG2Q8N1P7 616 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 THEM5Q8N1Q8 247 aa18.35■□□□□ 0.53
SKP2-201ENST00000274254 RBBP8NLQ8NC74 664 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms